Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032606 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 8.9e-56 219.9 104 100.0
CSS0015425 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 5.3e-40 167.5 113 75.2
CSS0049852 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 1.2e-39 166.4 113 77.0
CSS0028771 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 7.1e-37 157.1 113 74.3
CSS0042763 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 2.1e-36 155.6 110 73.6
CSS0047038 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 1.4e-21 106.3 113 58.4
Dinv26700 Davidia involucrata HOM05D000943 ORTHO05D006658 1.1e-10 70.1 52 71.2
Dinv13353 Davidia involucrata HOM05D000590 ORTHO05D006658 2.5e-10 68.9 52 67.3
Ciclev10021099m.g Citrus clementina HOM05D000590 ORTHO05D006658 2.2e-09 65.9 51 66.7
Oeu005375.1 Olea europaea HOM05D000590 ORTHO05D006658 2.8e-09 65.5 52 61.5
Thecc.07G135100 Theobroma cacao HOM05D000590 ORTHO05D006658 2.8e-09 65.5 52 65.4
THA.LOC104815580 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 4.8e-09 64.7 52 61.5
GSVIVG01014083001 Vitis vinifera HOM05D000590 ORTHO05D006658 6.3e-09 64.3 51 64.7
Actinidia12609 Actinidia chinensis HOM05D000590 ORTHO05D006658 8.2e-09 63.9 52 67.3
DCAR_019620 Daucus carota HOM05D000590 ORTHO05D006658 8.2e-09 63.9 51 62.7
Gohir.A04G045500 Gossypium hirsutum HOM05D000590 ORTHO05D006658 1.1e-08 63.5 49 65.3
Gohir.D05G337300 Gossypium hirsutum HOM05D000590 ORTHO05D006658 1.1e-08 63.5 49 65.3
Gorai.009G361500 Gossypium raimondii HOM05D000590 ORTHO05D006658 1.1e-08 63.5 49 65.3
QL08p025144 Quercus lobata HOM05D000590 ORTHO05D006658 1.1e-08 63.5 51 62.7
TWI38G1174 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 1.1e-08 63.5 49 65.3
Ah.06g187630 Amaranthus hybridus HOM05D000590 ORTHO05D006658 1.4e-08 63.2 51 62.7
Hund10399 Selenicereus undatus HOM05D000590 ORTHO05D006658 1.4e-08 63.2 50 64.0
Aa31LG8G1960 Aethionema arabicum HOM05D000590 ORTHO05D006658 1.8e-08 62.8 50 58.0
BcaB06g25360 Brassica carinata HOM05D000590 ORTHO05D006658 1.8e-08 62.8 52 59.6
Thhalv10021064m.g Eutrema salsugineum HOM05D000590 ORTHO05D006658 1.8e-08 62.8 50 62.0
Sp3g12970 Schrenkiella parvula HOM05D000590 ORTHO05D006658 2.4e-08 62.4 49 61.2
TAR627G0624 Trochodendron aralioides HOM05D000590 ORTHO05D006658 2.4e-08 62.4 52 63.5
Carub.0003s1441 Capsella rubella HOM05D000590 ORTHO05D006658 3.1e-08 62.0 50 62.0
Haze_08447 Corylus avellana HOM05D000590 ORTHO05D006658 3.1e-08 62.0 52 65.4
CARHR089680 Cardamine hirsuta HOM05D000590 ORTHO05D006658 4.1e-08 61.6 50 60.0
AT3G14740 Arabidopsis thaliana HOM05D000590 ORTHO05D006658 5.3e-08 61.2 50 60.0
COL.COLO4_17463 Corchorus olitorius HOM05D000590 ORTHO05D006658 5.3e-08 61.2 52 61.5
PGR031G2043 Punica granatum HOM05D000590 ORTHO05D006658 5.3e-08 61.2 50 62.0
THA.LOC104822584 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 5.3e-08 61.2 51 58.8
vmacro11976 Vaccinium macrocarpon HOM05D000590 ORTHO05D006658 5.3e-08 61.2 47 68.1
Atru.chr2.1901 Acer truncatum HOM05D000590 ORTHO05D006658 6.9e-08 60.8 50 64.0
Aqoxy1G01876 Aquilegia oxysepala HOM05D000590 ORTHO05D006658 6.9e-08 60.8 50 60.0
ClCG11G017110 Citrullus lanatus HOM05D000590 ORTHO05D006658 6.9e-08 60.8 50 60.0
CsaV3_4G032770 Cucumis sativus L. HOM05D000590 ORTHO05D006658 6.9e-08 60.8 50 60.0
Duzib213G0379 Durio zibethinus HOM05D000590 ORTHO05D006658 6.9e-08 60.8 51 62.7
TWI39G0773 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 6.9e-08 60.8 49 63.3
AL3G27050 Arabidopsis lyrata HOM05D000590 ORTHO05D006658 9.1e-08 60.5 52 57.7
Manes.03G078000 Manihot esculenta HOM05D000590 ORTHO05D006658 9.1e-08 60.5 51 62.7
Sc07g0002360 Simmondsia chinensis HOM05D000590 ORTHO05D006658 9.1e-08 60.5 46 60.9
PSO675G2935 Papaver somniferum HOM05D000590 ORTHO05D006658 1.2e-07 60.1 52 59.6
MSTRG.6694 Avicennia marina HOM05D000590 ORTHO05D006658 2.0e-07 59.3 52 59.6
CiPaw.11G155300 Carya illinoinensis HOM05D000590 ORTHO05D006658 2.0e-07 59.3 50 64.0
MELO3C025676.2 Cucumis melo HOM05D000590 ORTHO05D006658 2.0e-07 59.3 50 58.0
Nn6g34385 Nelumbo nucifera HOM05D000590 ORTHO05D006658 2.0e-07 59.3 52 59.6
Eucgr.F03226 Eucalyptus grandis HOM05D000590 ORTHO05D006658 2.6e-07 58.9 50 58.0
PSO541G5312 Papaver somniferum HOM05D000590 ORTHO05D006658 2.6e-07 58.9 52 57.7
A05p34710 Brassica napus HOM05D000590 ORTHO05D006658 4.5e-07 58.2 47 59.6
Sed0014657 Sechium edule HOM05D000590 ORTHO05D006658 5.9e-07 57.8 48 58.3
EL10Ac4g08438 Beta vulgaris HOM05D000590 ORTHO05D006658 7.7e-07 57.4 51 56.9
Sopen07g030360 Solanum pennellii HOM05D000590 ORTHO05D006658 7.7e-07 57.4 48 60.4
BcaC05g29040 Brassica carinata HOM05D000590 ORTHO05D006658 1.0e-06 57.0 47 57.4
C05p52510 Brassica napus HOM05D000590 ORTHO05D006658 1.0e-06 57.0 47 57.4
BolC5t33934H Brassica oleracea HOM05D000590 ORTHO05D006658 1.0e-06 57.0 47 57.4
Potri.001G382500 Populus trichocarpa HOM05D000590 ORTHO05D006658 1.3e-06 56.6 51 54.9
Aqoxy6G01959 Aquilegia oxysepala HOM05D000590 ORTHO05D006658 1.7e-06 56.2 50 56.0
Migut.H02030 Erythranthe guttata HOM05D000590 ORTHO05D006658 1.7e-06 56.2 53 56.6
HanXRQChr11g0330421 Helianthus annuus HOM05D000590 ORTHO05D006658 1.7e-06 56.2 48 60.4
BraA05t22287Z Brassica rapa HOM05D000590 ORTHO05D006658 2.2e-06 55.8 46 58.7
AUR62013940 Chenopodium quinoa HOM05D000590 ORTHO05D006658 2.2e-06 55.8 48 60.4
AUR62019672 Chenopodium quinoa HOM05D000590 ORTHO05D006658 2.2e-06 55.8 48 60.4
Sabra11G0077600 Salix brachista HOM05D000590 ORTHO05D006658 2.2e-06 55.8 51 54.9
Solyc07g062100.4 Solanum lycopersicum HOM05D000590 ORTHO05D006658 2.2e-06 55.8 48 60.4
Lsat_1_v5_gn_7_100300 Lactuca sativa HOM05D000590 ORTHO05D006658 3.8e-06 55.1 48 60.4
PGSC0003DMG400007086 Solanum tuberosum HOM05D000590 ORTHO05D006658 6.5e-06 54.3 48 58.3
CAN.G375.56 Capsicum annuum HOM05D000590 ORTHO05D006658 8.5e-06 53.9 34 73.5


User provided reference genes

Program Settings