Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 1.1e-74 283.1 133 100.0
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 5.2e-32 141.4 132 58.3
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 7.7e-28 127.5 135 52.6
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 7.0e-21 104.4 87 52.9
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 7.0e-21 104.4 87 54.0
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 9.1e-21 104.0 109 45.9
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 2.3e-19 99.4 133 41.4
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 2.9e-19 99.0 90 50.0
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 5.0e-19 98.2 129 44.2
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 4.2e-18 95.1 86 54.7
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 5.5e-18 94.7 130 42.3
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 1.6e-17 93.2 137 43.8
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.6e-17 93.2 135 43.7
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 3.6e-17 92.0 135 43.0
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 1.4e-16 90.1 101 47.5
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 1.8e-16 89.7 86 53.5
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 1.2e-15 87.0 91 49.5
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 1.5e-15 86.7 86 46.5
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 1.5e-15 86.7 86 51.2
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 3.4e-15 85.5 88 47.7
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 1.7e-14 83.2 132 37.1
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 6.3e-14 81.3 86 46.5
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 8.3e-14 80.9 81 49.4
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 2.4e-13 79.3 134 38.8
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 3.2e-13 79.0 97 44.3
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 1.6e-12 76.6 88 42.0
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 1.6e-12 76.6 88 50.0
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 2.0e-12 76.3 81 49.4
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 2.7e-12 75.9 83 45.8
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 6.6e-11 71.2 115 36.5
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 8.6e-11 70.9 83 43.4
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 8.6e-11 70.9 115 38.3
Dinv22752 Davidia involucrata HOM05D009134 ORTHO05D011284 1.2e-09 67.0 52 67.3
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 1.4e-08 63.5 88 38.6
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.8e-08 63.2 82 43.9
Oeu034450.1 Olea europaea HOM05D009134 ORTHO05D011284 2.3e-08 62.8 77 44.2
Lsat_1_v5_gn_2_68380 Lactuca sativa HOM05D009134 ORTHO05D011284 7.5e-07 57.8 76 42.1
AL4G42120 Arabidopsis lyrata HOM05D012296 ORTHO05D014409 2.2e-06 56.2 83 41.0
Sp7g17780 Schrenkiella parvula HOM05D012296 ORTHO05D014409 3.7e-06 55.5 101 33.7
Thhalv10001781m.g Eutrema salsugineum HOM05D012296 ORTHO05D014409 4.9e-06 55.1 85 38.8


User provided reference genes

Program Settings