Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.8e-75 285.8 143 100.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.7e-44 183.0 149 66.4
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.4e-43 177.9 150 66.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-39 166.8 126 70.6
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.7e-36 155.2 126 62.7
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.3e-33 146.7 126 59.5
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.9e-33 145.6 129 59.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.3e-32 141.7 126 59.5
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.2e-31 140.2 128 59.4
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 4.7e-31 138.3 126 55.6
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 6.1e-31 137.9 124 58.9
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.4e-30 136.7 128 54.7
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.8e-30 136.3 124 57.3
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 4.0e-30 135.2 133 52.6
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.2e-30 134.8 126 55.6
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.2e-30 134.8 124 58.1
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 6.8e-30 134.4 147 49.7
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 8.9e-30 134.0 133 51.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.2e-29 133.7 140 50.0
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 2.0e-29 132.9 126 54.0
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.0e-29 132.9 127 55.9
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.0e-29 132.9 126 52.4
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.4e-29 132.1 127 55.9
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.4e-29 131.7 126 53.2
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 4.4e-29 131.7 126 53.2
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.4e-29 131.7 126 53.2
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 9.8e-29 130.6 124 54.8
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.7e-28 129.8 147 48.3
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.7e-28 129.8 136 49.3
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.7e-28 129.8 149 46.3
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.7e-28 129.8 127 51.2
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.2e-28 129.4 127 55.9
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 2.9e-28 129.0 127 48.8
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 3.7e-28 128.6 126 52.4
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.9e-28 128.3 136 49.3
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 8.3e-28 127.5 149 47.7
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 8.3e-28 127.5 126 56.3
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.1e-27 127.1 124 53.2
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.4e-27 126.7 126 54.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.8e-27 126.3 126 54.0
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.4e-27 125.9 126 53.2
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 3.2e-27 125.6 127 52.8
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 3.2e-27 125.6 126 51.6
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 4.1e-27 125.2 117 55.6
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.4e-27 124.8 126 53.2
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 5.4e-27 124.8 126 53.2
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 7.0e-27 124.4 126 53.2
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 7.0e-27 124.4 126 50.8
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 7.0e-27 124.4 118 55.1
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 9.2e-27 124.0 118 55.9
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-26 123.6 112 57.1
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.0e-26 122.9 126 52.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.7e-26 122.5 124 52.4
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.5e-26 122.1 131 48.9
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.5e-26 122.1 125 53.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.0e-26 121.3 125 55.2
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.0e-25 120.6 130 53.1
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.3e-25 120.2 126 53.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.7e-25 119.8 126 50.8
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 3.0e-25 119.0 139 48.2
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.0e-25 119.0 130 48.5
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 5.0e-25 118.2 121 52.1
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 5.0e-25 118.2 121 51.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 5.0e-25 118.2 121 52.9
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 6.6e-25 117.9 111 54.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.5e-24 116.7 131 48.1
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.5e-24 116.7 126 49.2
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.9e-24 116.3 127 52.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.5e-24 115.9 111 54.1
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.5e-24 115.9 125 54.4
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.3e-24 115.2 111 53.2
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 7.3e-24 114.4 124 49.2
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 7.3e-24 114.4 127 49.6
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 7.3e-24 114.4 111 55.0
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.2e-23 113.6 111 51.4
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.2e-23 113.6 111 52.3
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.2e-23 113.6 111 52.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.6e-23 113.2 111 54.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.1e-23 112.8 111 55.0
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.8e-23 112.5 111 52.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.6e-23 112.1 138 46.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.6e-23 112.1 117 51.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 6.2e-23 111.3 111 51.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 6.2e-23 111.3 111 51.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 6.2e-23 111.3 111 51.4
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 8.0e-23 110.9 105 51.4
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.4e-22 110.2 111 51.4
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.4e-22 110.2 126 47.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.3e-22 109.4 112 52.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 4.0e-22 108.6 121 48.8
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 6.8e-22 107.8 109 51.4
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 8.9e-22 107.5 112 53.6
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 8.9e-22 107.5 112 53.6
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 3.4e-21 105.5 135 44.4
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.8e-21 104.0 71 66.2
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 9.8e-21 104.0 125 44.0
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.3e-20 100.9 127 45.7
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.3e-20 100.9 127 45.7
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.3e-20 100.9 127 45.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.9e-16 89.7 126 40.5
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.9e-16 89.7 103 45.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.5e-16 89.4 102 45.1
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 4.7e-15 85.1 101 45.5
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 3.1e-14 82.4 104 43.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.0e-06 55.5 101 37.6


User provided reference genes

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