Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.0e-71 274.2 266 100.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.2e-59 234.2 130 95.4
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.9e-58 228.8 130 93.1
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.9e-58 228.8 130 93.1
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.1e-57 224.9 130 91.5
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.4e-49 200.7 130 84.6
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.4e-41 174.1 122 73.0
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.1e-38 164.5 125 71.2
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-37 160.6 117 73.5
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 6.3e-37 158.7 115 71.3
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.4e-36 157.5 123 68.3
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.4e-33 147.5 159 57.2
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 4.2e-33 146.0 116 69.8
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 4.2e-33 146.0 140 59.3
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.1e-32 143.7 123 65.0
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 3.6e-32 142.9 113 66.4
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 1.0e-31 141.4 122 63.1
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.4e-31 141.0 122 62.3
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.4e-31 141.0 108 69.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.3e-31 140.2 123 62.6
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 5.1e-31 139.0 109 66.1
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 6.7e-31 138.7 119 67.2
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.3e-30 136.3 108 66.7
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 4.3e-30 136.0 124 60.5
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 4.3e-30 136.0 123 61.0
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 2.8e-29 133.3 124 60.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 8.2e-29 131.7 149 55.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 8.2e-29 131.7 124 61.3
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.4e-28 130.2 123 61.0
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.4e-28 130.2 122 61.5
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 9.1e-28 128.3 124 57.3
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-27 127.9 124 58.1
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 5.9e-27 125.6 115 60.0
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 5.9e-27 125.6 113 59.3
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 6.5e-26 122.1 117 57.3
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 6.5e-26 122.1 117 57.3
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 6.5e-26 122.1 117 57.3
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 1.4e-25 120.9 113 58.4
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 7.2e-25 118.6 126 54.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.2e-24 117.9 132 52.3
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 3.6e-24 116.3 124 54.0
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 3.6e-24 116.3 98 65.3
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 4.7e-24 115.9 117 56.4
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.0e-23 114.8 122 52.5
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 3.9e-23 112.8 111 56.8
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 3.9e-23 112.8 124 50.8
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 3.9e-23 112.8 125 53.6
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 3.9e-23 112.8 122 53.3
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 8.8e-23 111.7 122 53.3
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.1e-22 111.3 124 51.6
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 9.7e-22 108.2 135 44.4
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 2.8e-21 106.7 124 51.6
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 2.8e-21 106.7 124 50.8
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 4.8e-21 105.9 119 52.9
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 6.3e-21 105.5 141 48.9
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 6.3e-21 105.5 117 53.0
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 8.2e-21 105.1 124 52.4
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 8.2e-21 105.1 124 51.6
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 8.2e-21 105.1 124 51.6
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.4e-20 104.4 98 55.1
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 2.4e-20 103.6 119 51.3
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 2.4e-20 103.6 125 52.0
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 9.1e-20 101.7 124 48.4
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.5e-19 100.9 120 49.2
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.6e-19 100.1 126 50.8
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 7.7e-19 98.6 104 51.9
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 7.7e-19 98.6 110 54.5
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.0e-18 98.2 124 48.4
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.3e-18 97.8 123 53.7
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 2.9e-18 96.7 127 48.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 5.0e-18 95.9 124 49.2
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 6.5e-18 95.5 113 50.4
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 1.4e-17 94.4 122 47.5
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.2e-17 93.2 100 52.0
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 5.5e-17 92.4 106 52.8
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 9.4e-17 91.7 124 49.2
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.2e-16 91.3 122 47.5
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 2.1e-16 90.5 118 45.8
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.7e-16 90.1 118 45.8
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 3.6e-16 89.7 121 45.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 4.7e-16 89.4 116 47.4
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 1.0e-15 88.2 102 46.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.4e-15 87.8 126 50.0
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.3e-15 87.0 118 44.9
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 3.9e-15 86.3 116 45.7
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 5.2e-15 85.9 126 41.3
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 5.2e-15 85.9 122 45.9
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 6.7e-15 85.5 117 44.4
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 6.7e-15 85.5 118 44.1
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 8.8e-15 85.1 98 43.9
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 8.8e-15 85.1 66 68.2
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 8.8e-15 85.1 118 45.8
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 4.4e-14 82.8 118 44.1
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 7.4e-14 82.0 102 43.1
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 7.4e-14 82.0 83 55.4
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 9.7e-14 81.6 103 43.7
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 9.7e-14 81.6 113 44.2
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.3e-13 81.3 116 42.2
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 4.8e-13 79.3 114 43.0
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.4e-12 77.8 78 55.1
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.8e-12 77.4 117 44.4
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 5.3e-12 75.9 98 44.9
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 1.2e-11 74.7 142 40.8
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.6e-11 74.3 115 45.2
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 3.5e-11 73.2 96 45.8
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 1.0e-10 71.6 47 72.3
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.3e-10 71.2 100 46.0
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.9e-10 70.1 40 85.0
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.8e-10 69.7 100 45.0
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.0e-10 69.3 98 45.9
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 8.5e-10 68.6 67 52.2
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.5e-09 67.8 98 44.9
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 3.2e-09 66.6 114 43.0
CAN.G1340.10 Capsicum annuum HOM05D006591 ORTHO05D007861 6.1e-08 62.4 37 78.4
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 2.3e-07 60.5 51 58.8
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 5.2e-07 59.3 94 42.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 2.6e-06 57.0 85 42.4
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 9.7e-06 55.1 100 36.0


User provided reference genes

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