Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 6.4e-83 310.8 173 100.0
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 8.7e-72 273.9 173 89.6
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 2.1e-49 199.5 196 63.3
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 1.9e-47 193.0 197 62.9
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 9.7e-47 190.7 193 61.7
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 2.2e-46 189.5 181 64.6
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.4e-45 186.8 182 62.6
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.4e-45 186.8 193 62.7
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.8e-45 186.4 182 62.1
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 2.4e-45 186.0 182 62.6
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 9.0e-45 184.1 193 61.7
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 9.0e-45 184.1 179 63.7
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 1.2e-44 183.7 196 61.7
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 2.6e-44 182.6 196 59.7
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 2.6e-44 182.6 191 61.3
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 7.7e-44 181.0 170 65.3
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 2.9e-43 179.1 198 57.1
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 3.8e-43 178.7 197 59.4
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 1.1e-42 177.2 182 62.6
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 1.4e-42 176.8 176 63.1
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 2.5e-42 176.0 152 68.4
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 3.2e-42 175.6 176 59.1
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 9.4e-42 174.1 172 65.7
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 1.2e-41 173.7 188 61.2
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.2e-41 173.7 187 61.5
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 1.6e-41 173.3 192 59.4
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 2.7e-41 172.6 197 58.4
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 3.6e-41 172.2 181 60.8
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 6.1e-41 171.4 154 66.2
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 1.0e-40 170.6 187 59.4
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.0e-40 170.6 180 59.4
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 2.3e-40 169.5 181 59.7
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 2.3e-40 169.5 178 62.4
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 2.3e-40 169.5 161 64.6
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 5.1e-40 168.3 152 67.1
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 6.7e-40 167.9 186 58.6
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 6.7e-40 167.9 217 55.8
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 8.8e-40 167.5 152 67.8
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 2.0e-39 166.4 187 59.4
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 2.5e-39 166.0 189 56.1
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 7.4e-39 164.5 187 55.6
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 1.3e-38 163.7 190 56.8
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.7e-38 163.3 150 62.0
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 2.8e-38 162.5 198 56.6
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-37 160.6 125 70.4
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.4e-37 160.2 192 57.3
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.4e-37 160.2 202 54.0
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.8e-37 159.8 126 75.4
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 1.8e-37 159.8 191 56.0
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 3.1e-37 159.1 190 55.3
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 4.1e-37 158.7 131 69.5
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 4.1e-37 158.7 175 59.4
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 5.3e-37 158.3 153 63.4
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 5.3e-37 158.3 194 54.1
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 6.9e-37 157.9 192 56.2
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 9.1e-37 157.5 174 58.0
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 1.2e-36 157.1 185 53.5
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 1.2e-36 157.1 153 62.7
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.2e-36 157.1 169 59.8
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 1.2e-36 157.1 151 62.3
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 1.5e-36 156.8 187 53.5
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 2.6e-36 156.0 146 65.8
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 7.7e-36 154.5 145 62.8
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 7.7e-36 154.5 145 62.8
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 7.7e-36 154.5 145 62.8
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 1.3e-35 153.7 151 62.9
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 5.0e-35 151.8 170 58.8
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 1.1e-34 150.6 121 72.7
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 2.5e-34 149.4 151 58.9
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 2.5e-34 149.4 192 52.6
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 3.2e-34 149.1 151 60.9
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 4.2e-34 148.7 154 58.4
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 9.4e-34 147.5 143 59.4
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.2e-33 147.1 131 66.4
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 1.6e-33 146.7 121 70.2
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 2.7e-33 146.0 151 60.9
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 6.1e-33 144.8 123 68.3
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 7.9e-33 144.4 123 68.3
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 7.9e-33 144.4 138 61.6
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.0e-32 144.1 124 67.7
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 1.4e-32 143.7 122 68.9
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 1.4e-32 143.7 168 55.4
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 3.0e-32 142.5 130 65.4
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.5e-31 140.2 123 63.4
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 1.3e-30 137.1 134 59.0
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 2.2e-30 136.3 140 60.7
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 2.8e-30 136.0 154 59.7
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.7e-30 135.6 155 59.4
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 1.1e-29 134.0 140 55.7
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 2.0e-28 129.8 176 50.0
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.7e-27 126.7 157 56.1
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 8.5e-27 124.4 98 69.4
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 1.1e-26 124.0 124 58.9
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 4.2e-26 122.1 102 68.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 2.1e-25 119.8 87 73.6
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 2.7e-25 119.4 153 53.6
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 2.7e-25 119.4 153 53.6
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 1.5e-23 113.6 128 53.1
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 7.5e-23 111.3 123 55.3
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 1.3e-22 110.5 132 49.2
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 2.0e-20 103.2 125 56.0
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 2.6e-20 102.8 143 51.7
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 3.5e-20 102.4 121 53.7
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.2e-19 99.8 123 56.1
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-16 90.9 84 60.7
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-16 90.9 82 62.2
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.3e-16 89.7 97 57.7
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 1.2e-15 87.4 139 43.2
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.3e-14 84.0 80 61.2
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.3e-14 84.0 80 61.2
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 8.3e-14 81.3 151 38.4
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 5.0e-11 72.0 86 46.5
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 4.2e-10 68.9 173 31.8
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 1.2e-07 60.8 79 46.8
Duzib130G0001 Durio zibethinus HOM05D006899 ORTHO05D008566 1.7e-06 57.0 94 50.0
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 4.9e-06 55.5 37 64.9


User provided reference genes

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