Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.9e-257 892.1 476 100.0
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 1.5e-153 547.0 392 70.2
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.4e-148 530.4 507 60.9
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 3.2e-148 529.3 442 64.9
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 1.1e-137 494.2 382 66.5
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.5e-137 493.8 445 62.2
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 4.3e-137 492.3 446 61.0
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 1.1e-135 487.6 377 68.2
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 1.1e-135 487.6 453 59.8
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 1.8e-135 486.9 435 59.1
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 4.0e-135 485.7 439 61.0
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 5.2e-135 485.3 448 60.3
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 1.2e-134 484.2 435 60.5
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 2.0e-134 483.4 393 64.9
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.6e-134 483.0 446 61.0
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 3.4e-134 482.6 435 60.0
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 1.9e-132 476.9 451 59.0
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 4.6e-131 472.2 444 59.0
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 1.0e-130 471.1 382 63.9
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 1.0e-130 471.1 442 59.7
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 1.1e-129 467.6 377 64.2
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 1.1e-129 467.6 449 58.6
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 1.1e-129 467.6 377 64.5
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 5.6e-129 465.3 447 59.5
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.6e-128 463.8 385 63.4
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.6e-128 463.8 444 58.1
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 2.1e-128 463.4 440 59.5
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 3.6e-128 462.6 444 58.8
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 8.9e-127 458.0 388 62.1
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 9.9e-126 454.5 377 63.9
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 1.3e-125 454.1 444 57.0
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 1.7e-125 453.8 458 58.5
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 3.8e-125 452.6 451 59.0
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 6.4e-125 451.8 401 60.6
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 9.2e-124 448.0 469 57.4
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.7e-123 446.4 458 57.9
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 3.5e-123 446.0 454 59.0
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 1.0e-122 444.5 391 58.8
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 1.7e-122 443.7 400 61.0
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 8.6e-122 441.4 436 55.7
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.1e-121 441.0 401 59.1
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 1.5e-121 440.7 450 54.7
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 1.5e-118 430.6 301 73.1
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 7.6e-118 428.3 451 56.8
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.1e-116 424.5 437 53.5
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 2.1e-115 420.2 389 61.7
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 7.8e-115 418.3 377 59.4
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 6.6e-114 415.2 447 54.4
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 3.3e-113 412.9 388 60.1
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 1.3e-112 411.0 445 53.0
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 8.1e-112 408.3 445 55.5
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 5.3e-111 405.6 448 52.7
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 1.2e-110 404.4 390 58.5
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 7.6e-110 401.7 388 56.4
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 7.6e-110 401.7 441 52.2
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 2.9e-109 399.8 445 52.8
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 7.1e-108 395.2 389 55.5
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 9.3e-108 394.8 384 56.5
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 2.1e-107 393.7 386 54.9
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 4.6e-107 392.5 448 51.8
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 6.0e-107 392.1 449 51.7
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 6.0e-107 392.1 411 55.5
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 1.8e-106 390.6 389 55.5
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 1.8e-106 390.6 388 55.4
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 5.1e-106 389.0 396 54.5
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 5.1e-106 389.0 446 51.6
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 4.3e-105 386.0 474 49.6
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 4.8e-104 382.5 314 64.0
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 6.2e-104 382.1 381 56.4
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 9.0e-103 378.3 440 51.6
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 2.6e-102 376.7 384 55.5
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 5.8e-102 375.6 353 58.6
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 9.9e-102 374.8 347 59.7
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 3.2e-100 369.8 446 49.6
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 5.5e-100 369.0 419 50.6
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 2.7e-99 366.7 447 49.0
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.0e-98 364.8 382 55.2
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.8e-98 364.0 449 49.4
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 3.7e-96 356.3 301 60.8
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 1.5e-94 350.9 448 47.3
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 2.5e-92 343.6 394 47.7
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 5.7e-89 332.4 450 45.1
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 9.0e-87 325.1 450 44.4
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 2.6e-86 323.6 393 48.6
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 1.7e-85 320.9 444 46.2
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 2.2e-85 320.5 348 51.4
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 1.1e-84 318.2 450 42.9
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 5.5e-84 315.8 397 49.4
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 3.6e-83 313.2 212 72.2
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 1.6e-80 304.3 547 40.8
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 1.8e-79 300.8 451 42.8
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 5.5e-76 289.3 196 73.5
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 9.4e-76 288.5 328 48.8
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 1.5e-73 281.2 387 44.2
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 3.3e-73 280.0 381 44.4
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 2.2e-72 277.3 376 42.8
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.0e-69 268.5 245 56.7
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 4.5e-62 243.0 289 47.1
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 2.9e-61 240.4 427 38.9
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 1.3e-48 198.4 394 36.0
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 1.5e-44 184.9 270 39.3
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 8.9e-42 175.6 371 33.4
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 4.4e-41 173.3 119 71.4
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 1.7e-40 171.4 204 47.1
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.8e-40 170.6 364 34.9
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 2.4e-39 167.5 364 34.3
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 7.0e-39 166.0 399 33.3
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 1.3e-32 145.2 88 77.3
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 1.2e-27 128.6 94 68.1
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 1.6e-27 128.3 170 46.5
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 4.0e-26 123.6 419 27.0
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 2.3e-21 107.8 128 51.6
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 1.1e-20 105.5 138 52.9
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 2.9e-16 90.9 242 32.2
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 4.9e-16 90.1 222 35.6
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 5.4e-15 86.7 109 50.5
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 3.1e-10 70.9 97 44.3
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 1.5e-09 68.6 110 36.4
Thhalv10015964m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 5.4e-07 60.1 159 33.3


User provided reference genes

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