Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.1e-59 233.0 112 100.0
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.3e-47 193.0 120 80.0
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.4e-43 179.5 120 75.0
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 3.0e-41 171.8 121 71.9
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 5.1e-41 171.0 119 71.4
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.9e-40 169.1 120 70.0
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.1e-38 163.3 115 70.4
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 9.1e-38 160.2 116 71.6
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.2e-37 159.8 120 68.3
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 5.9e-37 157.5 121 70.2
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 5.9e-37 157.5 121 70.2
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.3e-36 156.4 121 70.2
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.3e-36 156.4 163 56.4
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.7e-36 156.0 119 66.4
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.7e-36 156.0 122 63.1
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 2.2e-36 155.6 121 68.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 3.8e-36 154.8 117 69.2
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 5.0e-36 154.5 121 66.9
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.9e-35 152.5 119 65.5
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.5e-35 152.1 119 63.0
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 3.2e-35 151.8 122 64.8
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 3.2e-35 151.8 124 63.7
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 3.2e-35 151.8 112 67.0
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 1.2e-34 149.8 114 64.9
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.2e-34 149.8 116 65.5
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.6e-34 149.4 108 67.6
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.6e-34 149.4 120 64.2
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 2.1e-34 149.1 122 64.8
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 2.1e-34 149.1 125 64.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.7e-34 148.7 120 65.8
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 3.6e-34 148.3 120 65.0
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.6e-34 148.3 117 65.8
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.7e-34 147.9 119 64.7
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 4.7e-34 147.9 128 63.3
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 4.7e-34 147.9 120 66.7
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 7.9e-34 147.1 117 67.5
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.0e-33 146.7 122 64.8
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.0e-33 146.7 119 64.7
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.0e-33 146.7 117 65.8
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.0e-33 146.7 117 65.0
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 1.4e-33 146.4 108 66.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.4e-33 146.4 125 64.0
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.4e-33 146.4 125 64.0
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 1.4e-33 146.4 125 63.2
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.4e-33 146.4 108 65.7
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.4e-33 146.4 119 63.9
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 1.8e-33 146.0 123 59.3
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.8e-33 146.0 119 63.9
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.8e-33 146.0 119 63.9
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.8e-33 146.0 119 63.9
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.8e-33 146.0 126 61.9
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 1.8e-33 146.0 79 84.8
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 2.3e-33 145.6 108 66.7
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 2.3e-33 145.6 125 63.2
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 2.3e-33 145.6 119 63.9
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 3.0e-33 145.2 79 82.3
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 3.9e-33 144.8 121 64.5
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 8.8e-33 143.7 116 62.9
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 8.8e-33 143.7 79 81.0
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 8.8e-33 143.7 120 62.5
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.1e-32 143.3 124 62.9
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.5e-32 142.9 119 63.9
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.5e-32 142.9 80 82.5
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.0e-32 142.5 125 63.2
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 2.0e-32 142.5 80 82.5
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 3.3e-32 141.7 126 61.9
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 4.4e-32 141.4 112 62.5
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 4.4e-32 141.4 124 61.3
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 5.7e-32 141.0 122 61.5
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 7.4e-32 140.6 78 80.8
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.3e-31 139.8 125 59.2
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.3e-31 139.8 80 81.2
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 1.4e-30 136.3 104 63.5
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 4.1e-30 134.8 111 61.3
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 4.1e-30 134.8 79 84.8
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 5.3e-30 134.4 64 100.0
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 6.9e-30 134.0 73 82.2
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.5e-29 132.9 89 74.2
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 2.0e-29 132.5 119 58.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 5.9e-29 131.0 98 66.3
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 5.9e-29 131.0 73 83.6
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.0e-28 130.2 95 64.2
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.0e-28 130.2 74 83.8
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.0e-28 130.2 94 72.3
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 1.1e-27 126.7 117 60.7
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 3.2e-27 125.2 127 55.9
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 3.2e-27 125.2 125 56.8
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 7.2e-27 124.0 89 67.4
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 9.4e-27 123.6 69 78.3
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 8.0e-26 120.6 76 76.3
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.7e-23 112.8 72 75.0
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 9.1e-22 107.1 71 66.2
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 2.0e-21 105.9 70 65.7
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 6.5e-20 100.9 58 82.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 1.9e-19 99.4 49 89.8
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 2.5e-19 99.0 48 91.7
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 3.7e-15 85.1 70 54.3
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.4e-14 83.2 73 53.4
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 3.0e-09 65.5 69 44.9
AUR62029117 Chenopodium quinoa HOM05D005849 ORTHO05D004704 5.2e-09 64.7 74 55.4
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 1.7e-07 59.7 75 50.7
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 6.3e-07 57.8 76 46.1
AT2G05310 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 9.1e-06 53.9 43 60.5


User provided reference genes

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