Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032502 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 2.1e-84 315.8 182 100.0
CSS0049807 Camellia sinensis var. sinensis HOM05D005390 ORTHO05D007086 4.7e-84 314.7 182 99.5
Dinv38486 Davidia involucrata HOM05D005390 ORTHO05D007086 1.2e-60 236.9 161 73.9
vmacro19255 Vaccinium macrocarpon HOM05D005390 ORTHO05D007086 3.0e-59 232.3 161 73.3
Rhsim08G0183100 Rhododendron simsii HOM05D005390 ORTHO05D007086 5.2e-59 231.5 160 74.4
Actinidia19375 Actinidia chinensis HOM05D005390 ORTHO05D007086 1.7e-57 226.5 161 87.0
Lj9C473T10 Lonicera japonica HOM05D005390 ORTHO05D007086 8.3e-57 224.2 175 82.9
Hma1.2p1_0983F.1_g244080 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 4.1e-56 221.9 161 70.2
Cc04_g10660 Coffea canephora HOM05D005390 ORTHO05D007086 2.0e-55 219.5 172 65.1
QL10p005602 Quercus lobata HOM05D005390 ORTHO05D007086 5.9e-55 218.0 161 85.7
PGSC0003DMG400027069 Solanum tuberosum HOM05D005390 ORTHO05D007086 7.8e-55 217.6 158 72.2
HanXRQChr09g0272781 Helianthus annuus HOM05D005390 ORTHO05D007086 1.7e-54 216.5 162 70.4
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 2.3e-54 216.1 161 75.2
Prupe.5G160000 Prunus persica HOM05D005390 ORTHO05D007086 2.3e-54 216.1 157 85.4
Solyc06g071850.3 Solanum lycopersicum HOM05D005390 ORTHO05D007086 3.0e-54 215.7 158 71.5
CiPaw.12G034500 Carya illinoinensis HOM05D005390 ORTHO05D007086 3.9e-54 215.3 161 83.2
Nn4g22507 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.9e-54 215.3 174 78.2
Sopen06g028130 Solanum pennellii HOM05D005390 ORTHO05D007086 3.9e-54 215.3 158 71.5
Peaxi162Scf00763g00330 Petunia axillaris HOM05D005390 ORTHO05D007086 5.0e-54 214.9 161 69.6
Cfa018904 Carpinus fangiana HOM05D005390 ORTHO05D007086 6.6e-54 214.5 161 73.3
GSVIVG01007574001 Vitis vinifera HOM05D005390 ORTHO05D007086 1.1e-53 213.8 161 83.2
TWI09G0451 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 1.5e-53 213.4 161 66.5
TWI39G0214 Tripterygium wilfordii HOM05D005390 ORTHO05D007086 1.5e-53 213.4 161 66.5
Atru.BG.198.p Acer truncatum HOM05D005390 ORTHO05D007086 1.9e-53 213.0 160 82.5
PSO017G5335 Papaver somniferum HOM05D005390 ORTHO05D007086 1.9e-53 213.0 174 64.9
PSO478G4661 Papaver somniferum HOM05D005390 ORTHO05D007086 4.3e-53 211.8 174 64.4
Nitab4.5_0000003g0930 Nicotiana tabacum HOM05D005390 ORTHO05D007086 9.5e-53 210.7 161 69.6
TPR.G38664 Trifolium pratense HOM05D005390 ORTHO05D007086 1.2e-52 210.3 161 66.5
TAR374G1738 Trochodendron aralioides HOM05D005390 ORTHO05D007086 1.6e-52 209.9 174 64.4
MD06G1160400 Malus domestica HOM05D005390 ORTHO05D007086 2.8e-52 209.1 157 84.1
CAN.G1046.1 Capsicum annuum HOM05D005390 ORTHO05D007086 1.0e-51 207.2 161 80.7
Medtr3g075240 Medicago truncatula HOM05D005390 ORTHO05D007086 1.0e-51 207.2 161 65.8
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 1.4e-51 206.8 161 82.0
Lsat_1_v5_gn_4_78320 Lactuca sativa HOM05D005390 ORTHO05D007086 2.3e-51 206.1 162 80.9
Aqoxy3G01354 Aquilegia oxysepala HOM05D005390 ORTHO05D007086 3.1e-51 205.7 174 63.2
CANSAT80G2255 Cannabis sativa HOM05D005390 ORTHO05D007086 3.1e-51 205.7 161 80.7
Manes.06G113700 Manihot esculenta HOM05D005390 ORTHO05D007086 4.0e-51 205.3 161 79.5
Nitab4.5_0014349g0010 Nicotiana tabacum HOM05D005390 ORTHO05D007086 4.0e-51 205.3 161 67.7
Oeu011587.1 Olea europaea HOM05D005390 ORTHO05D007086 5.2e-51 204.9 172 62.8
RcHm_v2.0_Chr7g0191501 Rosa chinensis HOM05D005390 ORTHO05D007086 5.2e-51 204.9 160 81.9
Glyma.04G191600 Glycine max HOM05D005390 ORTHO05D007086 1.2e-50 203.8 161 65.8
Hma1.2p1_2683F.1_g326880 Hydrangea macrophylla HOM05D005390 ORTHO05D007086 1.5e-50 203.4 161 66.5
FAN18G2367 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.6e-50 202.6 160 80.6
VMungo1309G2389 Vigna mungo HOM05D005390 ORTHO05D007086 2.6e-50 202.6 161 65.2
ClCG03G003390 Citrullus lanatus HOM05D005390 ORTHO05D007086 3.4e-50 202.2 174 73.0
FAN13G2995 Fragaria x ananassa HOM05D005390 ORTHO05D007086 3.4e-50 202.2 160 80.6
Thecc.03G120800 Theobroma cacao HOM05D005390 ORTHO05D007086 3.4e-50 202.2 159 80.5
DCAR_016426 Daucus carota HOM05D005390 ORTHO05D007086 4.4e-50 201.8 161 65.8
COL.COLO4_04551 Corchorus olitorius HOM05D005390 ORTHO05D007086 5.8e-50 201.4 158 81.0
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 7.5e-50 201.1 158 67.1
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 7.5e-50 201.1 158 67.1
FAN04G1107 Fragaria x ananassa HOM05D005390 ORTHO05D007086 9.8e-50 200.7 160 80.6
Oeu053506.1 Olea europaea HOM05D005390 ORTHO05D007086 9.8e-50 200.7 171 61.4
AL8G40290 Arabidopsis lyrata HOM05D005390 ORTHO05D007086 1.3e-49 200.3 161 75.2
Phvul.009G170000 Phaseolus vulgaris HOM05D005390 ORTHO05D007086 2.2e-49 199.5 161 64.0
Hund05621 Selenicereus undatus HOM05D005390 ORTHO05D007086 2.9e-49 199.1 161 75.8
Carub.0008s2396 Capsella rubella HOM05D005390 ORTHO05D007086 3.7e-49 198.7 161 74.5
Eucgr.B00166 Eucalyptus grandis HOM05D005390 ORTHO05D007086 3.7e-49 198.7 171 62.0
MELO3C002325.2 Cucumis melo HOM05D005390 ORTHO05D007086 4.9e-49 198.4 173 72.3
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 6.4e-49 198.0 176 58.0
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 6.4e-49 198.0 162 62.3
Aa31LG1G18770 Aethionema arabicum HOM05D005390 ORTHO05D007086 8.3e-49 197.6 161 73.3
Glyma.06G174300 Glycine max HOM05D005390 ORTHO05D007086 8.3e-49 197.6 161 78.3
CsaV3_1G009190 Cucumis sativus L. HOM05D005390 ORTHO05D007086 1.1e-48 197.2 173 71.7
Sp2g26330 Schrenkiella parvula HOM05D005390 ORTHO05D007086 1.4e-48 196.8 161 65.2
Sed0027546 Sechium edule HOM05D005390 ORTHO05D007086 1.4e-48 196.8 161 73.9
Potri.012G092000 Populus trichocarpa HOM05D005390 ORTHO05D007086 2.4e-48 196.1 161 77.0
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 5.4e-48 194.9 154 81.2
EL10Ac7g18053 Beta vulgaris HOM05D005390 ORTHO05D007086 7.0e-48 194.5 161 73.9
Gohir.A12G187300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 7.0e-48 194.5 161 78.9
AUR62025748 Chenopodium quinoa HOM05D005390 ORTHO05D007086 9.2e-48 194.1 161 74.5
Thhalv10003779m.g Eutrema salsugineum HOM05D005390 ORTHO05D007086 9.2e-48 194.1 161 72.7
Sabra12G0066700 Salix brachista HOM05D005390 ORTHO05D007086 9.2e-48 194.1 160 76.2
MSTRG.11518 Avicennia marina HOM05D005390 ORTHO05D007086 1.6e-47 193.4 171 71.9
Duzib205G1771 Durio zibethinus HOM05D005390 ORTHO05D007086 1.6e-47 193.4 157 80.9
CARHR277060 Cardamine hirsuta HOM05D005390 ORTHO05D007086 2.0e-47 193.0 161 73.3
AUR62001260 Chenopodium quinoa HOM05D005390 ORTHO05D007086 2.0e-47 193.0 161 74.5
Gorai.008G204100 Gossypium raimondii HOM05D005390 ORTHO05D007086 2.0e-47 193.0 161 78.3
Gohir.D12G190300 Gossypium hirsutum HOM05D005390 ORTHO05D007086 3.5e-47 192.2 161 78.3
Lj1g0026120 Lotus japonicus HOM05D005390 ORTHO05D007086 1.7e-46 189.9 178 68.5
Lalb_Chr11g0069761 Lupinus albus HOM05D005390 ORTHO05D007086 3.0e-46 189.1 116 80.2
THA.LOC104818200 Tarenaya hassleriana HOM05D005390 ORTHO05D007086 1.1e-45 187.2 162 73.5
ATR0824G019 Amborella trichopoda HOM05D005390 ORTHO05D007086 1.9e-45 186.4 161 60.2
Ciclev10019194m.g Citrus clementina HOM05D005390 ORTHO05D007086 2.5e-45 186.0 161 60.9
SalBow5G1843 Salvia bowleyana HOM05D005390 ORTHO05D007086 2.5e-45 186.0 171 70.2
arahy.Tifrunner.gnm1.ann1.EKVH9G Arachis hypogaea HOM05D005390 ORTHO05D007086 3.6e-44 182.2 116 78.4
FAN08G1670 Fragaria x ananassa HOM05D005390 ORTHO05D007086 2.3e-43 179.5 160 75.0
SGA_v2.0_scaffold25G10792 Striga asiatica HOM05D005390 ORTHO05D007086 8.9e-43 177.6 160 64.4
unitig_22.g5443 Utricularia gibba HOM05D005390 ORTHO05D007086 2.2e-41 172.9 174 66.1
SEGI_06673 Sequoiadendron giganteum HOM05D005390 ORTHO05D007086 5.4e-40 168.3 158 55.7
HPP92_001962 Vanilla planifolia HOM05D005390 ORTHO05D007086 2.7e-39 166.0 171 52.0
Mapoly0013s0178 Marchantia polymorpha HOM05D005390 ORTHO05D007086 3.0e-38 162.5 174 63.2
Cpa.g.sc4.44 Carica papaya HOM05D005390 ORTHO05D007086 1.5e-37 160.2 161 67.7
Zm00001eb144210 Zea mays HOM05D005390 ORTHO05D007086 2.5e-37 159.5 172 50.6
AT5G63200 Arabidopsis thaliana HOM05D005390 ORTHO05D007086 9.5e-37 157.5 161 64.6
AagrBONN_evm.TU.Sc2ySwM_228.344 Anthoceros agrestis HOM05D005390 ORTHO05D007086 6.8e-35 151.4 161 48.4
C09p09230 Brassica napus HOM05D005390 ORTHO05D007086 1.3e-33 147.1 162 62.3
BolC9t53836H Brassica oleracea HOM05D005390 ORTHO05D007086 1.3e-33 147.1 162 62.3
CsaV3_3G015420 Cucumis sativus L. HOM05D005390 ORTHO05D007086 1.3e-33 147.1 186 45.2
SMO356G0210 Selaginella moellendorffii HOM05D005390 ORTHO05D007086 4.9e-33 145.2 166 60.8
Migut.O00224 Erythranthe guttata HOM05D005390 ORTHO05D007086 3.3e-29 132.5 174 51.7
BraA09t36469Z Brassica rapa HOM05D005390 ORTHO05D007086 8.9e-27 124.4 161 55.3
Os01g0906600 Oryza sativa ssp. japonica HOM05D005390 ORTHO05D007086 4.4e-26 122.1 160 57.5
A09p08180 Brassica napus HOM05D005390 ORTHO05D007086 2.2e-25 119.8 161 54.7
Psat7g117320 Pisum sativum HOM05D005390 ORTHO05D004709 3.2e-24 115.9 92 66.3
CDE06G2390 Ceratophyllum demersum HOM05D005390 ORTHO05D007086 6.0e-23 111.7 109 56.0
Nn1g05493 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.4e-19 99.8 76 68.4
Nn5g27251 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.0e-18 96.7 63 74.6
Nn8g40909 Nelumbo nucifera HOM05D005390 ORTHO05D007086 5.8e-18 95.1 76 65.8
Nn5g28724 Nelumbo nucifera HOM05D005390 ORTHO05D007086 2.2e-17 93.2 76 64.5
Nn2g14552 Nelumbo nucifera HOM05D005390 ORTHO05D028071 7.1e-16 88.2 48 83.3
Nn8g39688 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.5e-15 85.9 58 74.1
Nn2g15275 Nelumbo nucifera HOM05D005390 ORTHO05D007086 1.1e-13 80.9 48 81.2
Nn1g08373 Nelumbo nucifera HOM05D005390 ORTHO05D007086 3.2e-08 62.8 31 87.1
A06p18430 Brassica napus HOM05D005390 ORTHO05D028071 7.9e-07 58.2 34 67.6
A09p53940 Brassica napus HOM05D005390 ORTHO05D028071 3.0e-06 56.2 34 64.7
BraA09t40810Z Brassica rapa HOM05D005390 ORTHO05D028071 3.0e-06 56.2 34 64.7


User provided reference genes

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