Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032487 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 5.3e-63 244.2 125 100.0
CSS0006840 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 2.2e-61 238.8 125 98.4
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 7.5e-33 144.1 91 79.1
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 2.8e-32 142.1 85 82.4
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 1.1e-31 140.2 85 82.4
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 1.1e-31 140.2 85 81.2
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 1.4e-31 139.8 85 82.4
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 1.8e-31 139.4 85 82.4
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 2.4e-31 139.0 85 81.2
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 2.4e-31 139.0 85 81.2
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 2.4e-31 139.0 85 80.0
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 3.1e-31 138.7 85 81.2
CiPaw.02G050800 Carya illinoinensis HOM05D006413 ORTHO05D007722 7.0e-31 137.5 94 73.4
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 7.0e-31 137.5 85 80.0
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 9.2e-31 137.1 85 80.0
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 9.2e-31 137.1 85 80.0
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 9.2e-31 137.1 85 81.2
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 9.2e-31 137.1 85 81.2
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 1.2e-30 136.7 89 78.7
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.2e-30 136.7 98 73.5
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 2.0e-30 136.0 85 81.2
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 2.7e-30 135.6 85 78.8
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 1.0e-29 133.7 85 75.3
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 1.0e-29 133.7 89 75.3
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 1.0e-29 133.7 85 74.1
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 1.3e-29 133.3 89 75.3
Ciclev10020349m.g Citrus clementina HOM05D006413 ORTHO05D007722 2.3e-29 132.5 89 75.3
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 2.3e-29 132.5 85 78.8
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 3.8e-29 131.7 89 74.2
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 5.0e-29 131.3 89 74.2
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 8.6e-29 130.6 85 74.1
Hma1.2p1_0074F.1_g038950 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 2.5e-28 129.0 85 71.8
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 3.3e-28 128.6 85 75.3
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 3.3e-28 128.6 85 74.1
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 3.3e-28 128.6 85 74.1
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 4.3e-28 128.3 92 78.3
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 4.3e-28 128.3 85 75.3
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 4.3e-28 128.3 98 70.4
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 4.3e-28 128.3 85 74.1
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 4.3e-28 128.3 85 75.3
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 7.3e-28 127.5 85 72.9
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 9.5e-28 127.1 85 72.9
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 9.5e-28 127.1 98 70.4
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 9.5e-28 127.1 85 72.9
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 9.5e-28 127.1 105 68.6
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.1e-27 125.9 97 70.1
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 2.1e-27 125.9 85 76.5
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 2.8e-27 125.6 85 78.8
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 3.6e-27 125.2 89 74.2
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 3.6e-27 125.2 85 72.9
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 4.7e-27 124.8 92 75.0
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 6.1e-27 124.4 96 69.8
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 8.0e-27 124.0 86 76.7
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 1.0e-26 123.6 89 71.9
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 1.4e-26 123.2 85 74.1
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 1.4e-26 123.2 134 56.0
Hund26913 Selenicereus undatus HOM05D006413 ORTHO05D007722 1.8e-26 122.9 87 69.0
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 2.3e-26 122.5 85 72.9
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 2.3e-26 122.5 85 74.1
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 2.3e-26 122.5 96 67.7
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 3.0e-26 122.1 96 68.8
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 5.2e-26 121.3 85 70.6
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 8.9e-26 120.6 82 69.5
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 1.2e-25 120.2 94 66.0
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 1.5e-25 119.8 85 68.2
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 2.6e-25 119.0 90 68.9
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 3.4e-25 118.6 90 68.9
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 3.4e-25 118.6 90 68.9
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 3.4e-25 118.6 106 64.2
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 4.4e-25 118.2 106 64.2
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 4.4e-25 118.2 90 68.9
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 5.8e-25 117.9 90 68.9
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 5.8e-25 117.9 90 68.9
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 5.8e-25 117.9 90 68.9
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 5.8e-25 117.9 90 68.9
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 1.3e-24 116.7 89 67.4
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 2.9e-24 115.5 90 67.8
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 6.4e-24 114.4 117 58.1
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 1.9e-23 112.8 90 65.6
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 2.4e-23 112.5 116 57.8
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 3.2e-23 112.1 85 67.1
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 1.6e-19 99.8 58 86.2
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 4.7e-19 98.2 92 53.3
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 2.3e-18 95.9 94 58.5
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 7.5e-17 90.9 85 54.1
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 6.4e-16 87.8 99 49.5
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 1.4e-15 86.7 85 49.4
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 3.2e-15 85.5 85 54.1
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 4.1e-15 85.1 85 51.8
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 1.2e-14 83.6 85 57.6
ATR0579G174 Amborella trichopoda HOM05D006413 ORTHO05D007722 4.6e-14 81.6 59 69.5
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 1.7e-13 79.7 139 42.4
vmacro12629 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 9.5e-12 73.9 44 81.8
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 3.6e-11 72.0 84 51.2
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 8.1e-11 70.9 44 79.5


User provided reference genes

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