Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.5e-138 494.6 249 100.0
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.8e-123 446.0 232 97.0
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 7.2e-112 407.5 232 87.5
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 8.3e-108 394.0 231 84.4
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 2.4e-107 392.5 232 83.2
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 7.8e-106 387.5 244 80.7
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 5.0e-105 384.8 236 79.7
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 6.6e-105 384.4 232 83.2
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 8.6e-105 384.0 232 81.0
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.6e-103 379.8 232 79.7
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 2.1e-103 379.4 232 80.2
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 2.8e-103 379.0 236 78.0
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 2.8e-103 379.0 232 80.2
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 3.6e-103 378.6 232 78.9
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.0e-102 377.1 240 77.5
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 3.0e-102 375.6 232 78.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 4.0e-102 375.2 225 80.4
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.0e-101 372.9 232 77.6
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 3.4e-101 372.1 240 76.2
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 3.4e-101 372.1 225 81.8
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 4.4e-101 371.7 232 77.2
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 9.8e-101 370.5 232 78.4
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 1.3e-100 370.2 232 77.2
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.7e-100 369.8 261 71.6
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 1.7e-100 369.8 232 78.9
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 4.9e-100 368.2 232 76.7
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 4.9e-100 368.2 232 78.0
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.1e-99 367.1 232 77.2
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 1.1e-99 367.1 232 76.7
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 2.4e-99 365.9 232 78.0
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.2e-99 365.5 243 75.7
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 4.1e-99 365.2 232 77.2
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 4.1e-99 365.2 232 76.7
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 5.4e-99 364.8 225 77.3
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 7.0e-99 364.4 231 77.5
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 7.0e-99 364.4 232 78.0
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 9.2e-99 364.0 232 77.2
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 1.6e-98 363.2 232 75.4
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.7e-98 362.5 232 76.3
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 3.5e-98 362.1 232 75.9
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 5.9e-98 361.3 248 71.8
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 2.3e-97 359.4 238 73.9
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 5.0e-97 358.2 248 71.4
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 8.6e-97 357.5 232 75.0
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.1e-96 357.1 240 74.2
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 2.5e-96 355.9 232 74.6
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.3e-96 355.5 232 74.6
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 5.6e-96 354.8 232 76.3
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 9.5e-96 354.0 232 76.3
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.2e-95 353.6 232 75.4
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 1.6e-95 353.2 223 75.3
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 3.6e-95 352.1 232 73.7
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 6.2e-95 351.3 232 75.9
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 8.0e-95 350.9 232 72.4
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 1.4e-94 350.1 232 74.6
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.4e-94 350.1 225 75.6
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 2.3e-94 349.4 232 72.8
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 4.0e-94 348.6 232 74.6
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 5.2e-94 348.2 244 70.9
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 6.8e-94 347.8 233 73.4
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 8.9e-94 347.4 238 73.1
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 1.2e-93 347.1 233 75.1
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.5e-93 346.7 232 72.8
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 2.0e-93 346.3 232 72.8
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 2.6e-93 345.9 232 73.3
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.6e-93 345.9 193 87.0
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 1.3e-92 343.6 232 73.7
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 3.7e-92 342.0 232 70.7
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 3.7e-92 342.0 232 70.3
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 1.1e-91 340.5 264 66.7
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 1.9e-91 339.7 232 71.6
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 2.4e-91 339.3 232 71.6
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 2.4e-91 339.3 232 72.0
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 2.4e-91 339.3 232 72.4
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 3.2e-91 339.0 232 71.6
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 3.2e-91 339.0 232 71.6
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 1.6e-90 336.7 232 69.4
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 2.7e-90 335.9 232 70.7
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 2.7e-90 335.9 233 71.2
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 6.0e-90 334.7 232 70.7
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.0e-89 334.0 220 72.7
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 1.3e-89 333.6 209 76.6
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 1.3e-89 333.6 240 67.9
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 7.3e-88 327.8 255 63.9
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 9.5e-88 327.4 208 76.4
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 3.6e-87 325.5 232 70.7
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 4.7e-87 325.1 199 78.9
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 4.0e-86 322.0 232 71.1
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 5.2e-86 321.6 179 88.8
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.3e-84 317.0 235 68.9
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.9e-83 313.2 193 79.3
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.5e-82 308.9 198 74.7
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 6.0e-82 308.1 198 74.2
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.3e-81 307.0 198 75.3
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 3.9e-81 305.4 198 73.7
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 4.7e-79 298.5 232 65.9
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 2.0e-77 293.1 198 72.7
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.7e-76 290.0 232 63.8
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 7.1e-75 284.6 262 59.2
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.2e-74 283.9 236 61.4
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 4.7e-71 271.9 233 56.7
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.4e-70 270.4 227 60.8
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 2.4e-67 259.6 233 57.1
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 6.6e-65 251.5 202 65.3
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 5.6e-64 248.4 232 53.4
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.1e-59 234.2 201 57.7
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 3.2e-59 232.6 148 78.4
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 1.0e-57 227.6 242 50.0
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 8.7e-57 224.6 196 59.7
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 8.2e-47 191.4 214 49.1
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 2.6e-29 133.3 224 37.1
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 3.9e-25 119.4 122 54.9
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 3.6e-18 96.3 222 31.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 3.0e-17 93.2 63 73.0
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 1.5e-11 74.3 227 29.1
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 1.4e-09 67.8 56 57.1
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 1.4e-09 67.8 56 57.1
Rhsim07G0184600 Rhododendron simsii HOM05D035565 ORTHO05D339362 2.8e-07 60.1 45 66.7


User provided reference genes

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