Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.4e-165 584.3 314 100.0
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 7.6e-159 563.9 314 93.9
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.9e-155 551.6 326 91.7
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.5e-98 363.6 310 63.5
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.5e-95 352.4 319 63.9
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.5e-93 346.3 312 63.5
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 2.2e-57 226.9 314 46.5
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.8e-57 226.1 320 45.9
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.4e-56 222.2 305 45.9
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.7e-41 174.1 225 45.8
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.0e-39 165.6 240 42.9
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 8.5e-33 145.2 305 36.4
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.1e-29 134.8 218 37.6
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 2.0e-21 107.5 104 51.0
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.3e-20 104.8 143 40.6
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 1.4e-19 101.3 108 47.2
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 1.8e-19 100.9 111 45.9
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 6.9e-19 99.0 190 33.7
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 1.2e-18 98.2 98 50.0
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 2.6e-18 97.1 136 42.6
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.6e-18 97.1 137 41.6
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 4.5e-18 96.3 239 31.0
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 7.7e-18 95.5 137 41.6
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 7.7e-18 95.5 237 30.4
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 2.2e-17 94.0 114 47.4
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 2.2e-17 94.0 145 36.6
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 5.0e-17 92.8 156 34.6
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 5.0e-17 92.8 135 40.7
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 1.1e-16 91.7 100 47.0
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 3.2e-16 90.1 100 47.0
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 4.2e-16 89.7 141 39.0
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 4.2e-16 89.7 141 39.0
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 7.2e-16 89.0 130 37.7
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 9.4e-16 88.6 143 35.7
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.6e-15 87.8 173 34.7
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 1.6e-15 87.8 135 39.3
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.1e-15 87.4 137 39.4
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 2.1e-15 87.4 97 43.3
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 2.1e-15 87.4 142 39.4
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 2.7e-15 87.0 181 31.5
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 4.7e-15 86.3 136 41.2
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 4.7e-15 86.3 142 38.7
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 7.9e-15 85.5 102 46.1
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 7.9e-15 85.5 143 33.6
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 1.4e-14 84.7 99 43.4
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.3e-14 84.0 102 43.1
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 2.3e-14 84.0 99 42.4
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 2.3e-14 84.0 99 42.4
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 6.7e-14 82.4 104 35.6
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 2.6e-13 80.5 106 34.9
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 5.7e-13 79.3 178 31.5
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 9.7e-13 78.6 302 24.5
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 3.7e-12 76.6 241 24.1
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 3.7e-12 76.6 125 37.6
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 6.3e-12 75.9 224 28.6
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 6.3e-12 75.9 105 39.0
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 2.4e-11 73.9 101 41.6
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.6e-10 71.2 293 27.6
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 3.5e-10 70.1 105 37.1
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 4.5e-10 69.7 211 29.4
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 5.9e-10 69.3 121 28.9
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 7.7e-10 68.9 105 34.3
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 1.3e-09 68.2 105 33.3
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 1.7e-09 67.8 208 27.4
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 1.7e-09 67.8 111 36.9
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 2.9e-09 67.0 309 24.3
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 3.8e-09 66.6 111 34.2
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.5e-08 64.7 105 28.6
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 3.2e-08 63.5 114 32.5
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 3.2e-08 63.5 133 30.1
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 4.2e-08 63.2 211 24.2
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 1.2e-07 61.6 49 61.2
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 2.1e-07 60.8 124 32.3
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 2.1e-07 60.8 209 28.2
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 1.8e-06 57.8 102 32.4
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 5.2e-06 56.2 126 29.4
CANSAT11G0715 Cannabis sativa HOM05D000125 ORTHO05D000120 8.8e-06 55.5 108 30.6


User provided reference genes

Program Settings