Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 2.4e-75 285.4 142 100.0
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 7.7e-34 147.5 161 53.4
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 1.3e-28 130.2 162 48.1
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 1.1e-27 127.1 172 45.3
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.8e-27 126.3 161 44.7
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 2.4e-27 125.9 161 46.6
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 3.1e-27 125.6 171 45.0
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 2.0e-26 122.9 171 43.9
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 5.9e-26 121.3 174 42.0
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.3e-25 120.2 160 44.4
CSS0021487 Camellia sinensis var. sinensis HOM05D068293 ORTHO05D006851 1.7e-25 119.8 70 87.1
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 8.5e-25 117.5 165 41.8
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 1.5e-24 116.7 164 42.1
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 3.2e-24 115.5 164 42.1
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 4.2e-24 115.2 167 41.9
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 5.5e-24 114.8 165 41.2
CSS0038706 Camellia sinensis var. sinensis HOM05D068293 ORTHO05D006851 9.4e-24 114.0 64 89.1
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 8.0e-23 110.9 152 43.4
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.4e-22 110.2 166 41.6
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.8e-22 109.8 167 41.9
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 5.2e-22 108.2 164 41.5
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 6.8e-22 107.8 154 43.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 6.8e-22 107.8 148 39.9
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.2e-21 107.1 164 39.6
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.6e-21 105.9 164 40.2
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.6e-21 105.9 166 39.8
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.6e-21 105.9 166 39.8
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.6e-21 105.9 169 37.9
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 3.4e-21 105.5 163 39.3
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.4e-21 105.5 147 42.9
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.7e-21 104.8 159 40.3
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 7.5e-21 104.4 165 39.4
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.3e-20 103.6 165 37.6
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.7e-20 103.2 164 39.0
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 2.2e-20 102.8 150 39.3
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 2.2e-20 102.8 165 40.0
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.8e-20 101.7 159 39.6
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.8e-20 101.7 159 39.6
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 6.3e-20 101.3 167 35.3
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.1e-19 100.5 164 38.4
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.1e-19 100.5 164 38.4
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.4e-19 100.1 157 39.5
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.4e-19 100.1 163 38.7
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.8e-19 99.8 159 39.0
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.8e-19 99.8 164 38.4
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.4e-19 99.4 154 38.3
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.1e-19 99.0 164 37.8
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 3.1e-19 99.0 147 39.5
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 4.1e-19 98.6 166 40.4
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 5.4e-19 98.2 164 37.2
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 2.7e-18 95.9 154 40.3
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.5e-18 95.5 150 40.7
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 3.5e-18 95.5 159 37.7
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 4.5e-18 95.1 158 39.2
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.9e-18 94.7 156 38.5
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.9e-18 94.7 156 38.5
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.7e-18 94.4 147 40.1
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.0e-17 94.0 163 38.7
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.3e-17 93.6 155 34.8
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.7e-17 93.2 170 38.2
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 2.3e-17 92.8 156 37.2
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 3.8e-17 92.0 155 34.8
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 5.0e-17 91.7 175 35.4
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 6.5e-17 91.3 146 38.4
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 6.5e-17 91.3 158 38.6
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.1e-16 90.5 162 35.2
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.9e-16 89.7 171 34.5
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.3e-16 89.0 149 40.9
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 4.2e-16 88.6 158 35.4
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 5.5e-16 88.2 152 36.2
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 7.2e-16 87.8 160 33.8
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 1.2e-15 87.0 151 32.5
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.2e-15 87.0 177 33.3
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 3.6e-15 85.5 170 34.7
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 3.6e-15 85.5 163 36.8
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.7e-15 85.1 162 32.1
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.7e-15 85.1 149 34.9
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 6.1e-15 84.7 157 38.2
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.0e-14 84.0 154 37.7
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.0e-14 84.0 172 33.1
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-14 84.0 162 32.1
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.0e-14 84.0 160 34.4
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 1.0e-14 84.0 178 36.0
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.4e-14 83.6 149 38.9
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.4e-14 83.6 140 36.4
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.8e-14 83.2 166 31.9
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.8e-14 83.2 166 31.9
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.8e-14 83.2 166 31.9
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 1.8e-14 83.2 166 31.9
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 1.8e-14 83.2 169 32.5
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 1.8e-14 83.2 150 38.7
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 4.0e-14 82.0 162 34.6
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.2e-14 81.6 147 41.5
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 5.2e-14 81.6 162 34.6
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 6.8e-14 81.3 149 35.6
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 8.9e-14 80.9 149 36.9
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 2.6e-13 79.3 155 34.2
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 2.6e-13 79.3 151 31.1
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 4.4e-13 78.6 170 35.9
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 4.4e-13 78.6 170 35.9
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 7.5e-13 77.8 151 36.4
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 9.8e-13 77.4 153 33.3
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 9.8e-13 77.4 157 35.7
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.3e-12 77.0 163 35.0
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.3e-12 77.0 164 34.8
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.3e-12 77.0 155 32.9
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 1.7e-12 76.6 192 29.2
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 2.2e-12 76.3 193 29.5
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 2.2e-12 76.3 164 34.8
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 4.9e-12 75.1 154 31.2
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 6.3e-12 74.7 153 30.7
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 6.3e-12 74.7 161 32.9
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.4e-11 73.6 196 28.1
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 1.4e-11 73.6 144 34.0
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.8e-11 73.2 151 29.8
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 3.1e-11 72.4 161 33.5
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 4.1e-11 72.0 120 40.8
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 7.0e-11 71.2 136 37.5
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 9.2e-11 70.9 153 38.6
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.2e-11 70.9 164 33.5
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.6e-10 70.1 166 34.3
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 2.0e-10 69.7 177 32.2
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 3.5e-10 68.9 144 31.9
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.5e-10 68.6 175 29.7
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 7.8e-10 67.8 148 33.8
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.0e-09 67.4 148 35.1
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.3e-09 67.0 156 35.3
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 5.0e-09 65.1 198 29.8
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 8.6e-09 64.3 137 37.2
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.5e-08 63.5 151 33.1
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 1.8e-06 56.6 137 31.4


User provided reference genes

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