Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.0e-151 540.0 268 100.0
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.2e-128 463.4 228 100.0
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 1.5e-118 429.9 236 89.0
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 6.2e-117 424.5 236 87.7
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.1e-116 423.7 224 91.5
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 6.8e-116 421.0 224 90.6
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 6.8e-116 421.0 224 91.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.5e-115 419.9 223 91.0
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 1.5e-115 419.9 226 91.2
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 3.4e-115 418.7 226 91.2
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 3.4e-115 418.7 224 91.5
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 5.8e-115 417.9 223 90.1
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 9.8e-115 417.2 221 91.4
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 2.9e-114 415.6 225 88.4
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.7e-114 415.2 224 89.7
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 6.4e-114 414.5 239 84.9
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 8.3e-114 414.1 230 89.1
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 3.2e-113 412.1 225 88.9
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 5.4e-113 411.4 239 85.4
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 5.4e-113 411.4 225 89.8
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.2e-112 410.2 224 88.4
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.2e-112 410.2 222 90.5
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 2.7e-112 409.1 225 90.7
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.0e-111 407.1 224 87.1
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.0e-111 407.1 227 88.1
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 2.3e-111 406.0 239 85.4
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 2.3e-111 406.0 239 85.4
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.3e-111 406.0 227 87.7
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 5.1e-111 404.8 239 84.5
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.5e-110 403.3 228 88.2
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 1.5e-110 403.3 235 84.7
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 2.5e-110 402.5 234 84.6
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.5e-110 402.5 229 86.5
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.3e-110 401.7 249 82.3
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 7.3e-110 401.0 223 87.4
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 1.6e-109 399.8 230 85.7
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 4.7e-109 398.3 221 86.4
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.3e-108 396.0 229 85.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 3.1e-108 395.6 222 88.3
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.0e-108 395.2 229 84.7
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 8.9e-108 394.0 220 86.8
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 8.9e-108 394.0 231 85.3
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.5e-107 393.3 239 82.4
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 4.4e-107 391.7 226 88.1
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 5.8e-107 391.3 247 79.4
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 3.7e-106 388.7 219 88.6
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.1e-105 387.1 236 82.2
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.4e-105 386.7 233 83.3
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.9e-105 386.3 245 79.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 7.1e-105 384.4 235 82.1
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 7.1e-105 384.4 235 82.1
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 9.2e-105 384.0 231 83.5
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.1e-104 382.9 221 84.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 2.1e-104 382.9 221 84.2
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.3e-103 380.2 258 76.0
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.3e-103 380.2 218 84.9
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 9.5e-102 374.0 232 82.3
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.8e-101 372.5 238 80.3
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.8e-101 372.5 238 80.3
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 1.4e-100 370.2 249 75.1
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 1.8e-100 369.8 221 80.5
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 3.1e-100 369.0 242 78.1
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 1.5e-99 366.7 234 82.1
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 9.9e-99 364.0 228 80.3
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.1e-97 357.8 223 82.5
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.5e-96 355.5 223 82.1
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 5.1e-95 351.7 221 81.4
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.9e-94 349.7 223 78.0
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.5e-94 349.4 221 75.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.3e-94 348.6 221 74.2
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.6e-93 346.7 222 76.1
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 8.1e-93 344.4 223 75.8
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 7.6e-91 337.8 225 74.7
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 7.6e-91 337.8 220 77.7
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 4.9e-90 335.1 225 72.4
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 8.4e-90 334.3 228 71.5
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 9.3e-89 330.9 245 71.4
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.1e-88 329.7 198 83.3
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 1.0e-87 327.4 178 88.8
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.0e-87 327.4 245 71.4
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.0e-87 327.4 188 85.6
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.1e-85 319.7 223 76.2
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 9.0e-84 314.3 225 71.1
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 5.8e-83 311.6 187 83.4
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 3.9e-79 298.9 226 69.5
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 1.8e-71 273.5 244 61.5
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.3e-71 273.1 220 63.2
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 2.4e-68 263.1 139 92.8
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 5.3e-68 261.9 140 87.9
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.2e-61 240.0 225 51.6
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 9.0e-60 234.6 163 73.6
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 5.0e-58 228.8 219 53.4
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 1.1e-54 217.6 234 51.7
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.5e-54 217.2 141 75.9
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.0e-30 137.1 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.3e-23 113.6 217 33.2
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 5.2e-15 85.9 111 54.1
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 4.1e-12 76.3 57 66.7


User provided reference genes

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