Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006994 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 1.1e-116 423.3 215 100.0
CSS0032384 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 1.1e-116 423.3 215 100.0
CSS0000160 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 3.6e-91 338.6 196 88.8
CSS0008834 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 6.7e-82 307.8 196 82.7
CSS0043047 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 3.3e-81 305.4 276 64.1
CSS0045073 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 3.3e-81 305.4 276 64.1
Actinidia23941 Actinidia chinensis HOM05D006354 ORTHO05D007773 1.2e-73 280.4 276 58.0
vmacro14519 Vaccinium macrocarpon HOM05D006354 ORTHO05D007773 2.2e-72 276.2 274 56.9
Dinv17001 Davidia involucrata HOM05D006354 ORTHO05D007773 1.3e-69 266.9 265 58.5
Dinv42950 Davidia involucrata HOM05D006354 ORTHO05D007773 1.3e-69 266.9 265 58.5
Dinv43150 Davidia involucrata HOM05D006354 ORTHO05D007773 1.3e-69 266.9 265 58.5
PGSC0003DMG402026981 Solanum tuberosum HOM05D006354 ORTHO05D007773 2.5e-68 262.7 276 52.9
Nitab4.5_0004018g0070 Nicotiana tabacum HOM05D006354 ORTHO05D007773 9.4e-68 260.8 270 53.7
Peaxi162Scf00046g10227 Petunia axillaris HOM05D006354 ORTHO05D007773 1.2e-67 260.4 274 53.3
CAN.G1046.5 Capsicum annuum HOM05D006354 ORTHO05D007773 1.6e-67 260.0 276 52.9
Hund18908 Selenicereus undatus HOM05D006354 ORTHO05D007773 1.6e-67 260.0 276 54.3
Sopen06g028180 Solanum pennellii HOM05D006354 ORTHO05D007773 2.1e-67 259.6 276 52.9
Cc01_g12860 Coffea canephora HOM05D006354 ORTHO05D007773 2.7e-67 259.2 273 53.5
Solyc06g071900.3 Solanum lycopersicum HOM05D006354 ORTHO05D007773 2.7e-67 259.2 276 52.5
Hma1.2p1_0418F.1_g149110 Hydrangea macrophylla HOM05D006354 ORTHO05D007773 4.7e-67 258.5 273 54.6
QL01p032009 Quercus lobata HOM05D006354 ORTHO05D007773 8.8e-66 254.2 275 53.1
DCAR_018909 Daucus carota HOM05D006354 ORTHO05D007773 7.5e-65 251.1 276 52.2
AUR62001785 Chenopodium quinoa HOM05D006354 ORTHO05D007773 1.3e-64 250.4 276 51.1
ClCG02G020110 Citrullus lanatus HOM05D006354 ORTHO05D007773 1.3e-64 250.4 277 51.6
CsaV3_6G016810 Cucumis sativus L. HOM05D006354 ORTHO05D007773 2.2e-64 249.6 277 52.0
Manes.01G174100 Manihot esculenta HOM05D006354 ORTHO05D007773 3.7e-64 248.8 276 53.3
HanXRQChr08g0235771 Helianthus annuus HOM05D006354 ORTHO05D007773 4.9e-64 248.4 274 50.0
Sc06g0008310 Simmondsia chinensis HOM05D006354 ORTHO05D007773 6.3e-64 248.1 274 50.4
Haze_12045 Corylus avellana HOM05D002216 ORTHO05D007773 8.3e-64 247.7 276 52.5
MELO3C025913.2 Cucumis melo HOM05D006354 ORTHO05D007773 1.1e-63 247.3 277 51.6
TWI79G1739 Tripterygium wilfordii HOM05D006354 ORTHO05D007773 1.1e-63 247.3 274 50.0
MSTRG.18578 Avicennia marina HOM05D006354 ORTHO05D007773 1.8e-63 246.5 273 50.9
DCAR_005337 Daucus carota HOM05D006354 ORTHO05D007773 1.8e-63 246.5 276 52.5
Cpa.g.sc81.152 Carica papaya HOM05D006354 ORTHO05D007773 2.4e-63 246.1 276 51.4
CiPaw.13G094400 Carya illinoinensis HOM05D006354 ORTHO05D007773 2.4e-63 246.1 276 52.5
Rhsim01G0227400 Rhododendron simsii HOM05D006354 ORTHO05D007773 2.4e-63 246.1 276 54.0
Cfa009012 Carpinus fangiana HOM05D002216 ORTHO05D007773 3.1e-63 245.7 276 51.8
SalBow3G3492 Salvia bowleyana HOM05D006354 ORTHO05D007773 4.1e-63 245.4 274 50.0
FAN21G2277 Fragaria x ananassa HOM05D006354 ORTHO05D007773 5.4e-63 245.0 276 52.9
Glyma.15G038300 Glycine max HOM05D006354 ORTHO05D007773 7.0e-63 244.6 276 52.5
RcHm_v2.0_Chr5g0064501 Rosa chinensis HOM05D006354 ORTHO05D007773 9.2e-63 244.2 276 52.2
Thecc.10G082700 Theobroma cacao HOM05D006354 ORTHO05D007773 9.2e-63 244.2 274 52.2
Duzib168G1732 Durio zibethinus HOM05D006354 ORTHO05D007773 1.2e-62 243.8 274 50.7
Phvul.L005443 Phaseolus vulgaris HOM05D006354 ORTHO05D007773 1.6e-62 243.4 276 52.2
Prupe.6G077700 Prunus persica HOM05D006354 ORTHO05D007773 1.6e-62 243.4 276 52.2
FAN16G3445 Fragaria x ananassa HOM05D006354 ORTHO05D007773 2.0e-62 243.0 276 52.5
Manes.07G091301 Manihot esculenta HOM05D006354 ORTHO05D007773 2.0e-62 243.0 274 52.6
Sabra09G0021800 Salix brachista HOM05D006354 ORTHO05D007773 2.0e-62 243.0 274 51.1
Manes.07G090800 Manihot esculenta HOM05D006354 ORTHO05D007773 3.5e-62 242.3 276 52.2
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 5.9e-62 241.5 216 62.0
Potri.009G030900 Populus trichocarpa HOM05D006354 ORTHO05D007773 5.9e-62 241.5 274 50.7
Migut.D02102 Erythranthe guttata HOM05D006354 ORTHO05D007773 1.0e-61 240.7 274 50.7
Lalb_Chr17g0347271 Lupinus albus HOM05D006354 ORTHO05D007773 1.0e-61 240.7 274 51.5
FvH4_3g36060 Fragaria vesca HOM05D006354 ORTHO05D007773 2.3e-61 239.6 276 51.4
PGR083G0842 Punica granatum HOM05D006354 ORTHO05D007773 2.3e-61 239.6 274 49.6
FAN11G1115 Fragaria x ananassa HOM05D006354 ORTHO05D007773 2.9e-61 239.2 276 51.1
Lj2A1062T49 Lonicera japonica HOM05D006354 ORTHO05D007773 2.9e-61 239.2 264 52.7
unitig_746.g26734 Utricularia gibba HOM05D006354 ORTHO05D007773 6.6e-61 238.0 275 48.7
Ah.06g184240 Amaranthus hybridus HOM05D006354 ORTHO05D007773 8.6e-61 237.7 274 49.3
CANSAT54G2536 Cannabis sativa HOM05D006354 ORTHO05D007773 8.6e-61 237.7 274 50.4
THA.LOC104800659 Tarenaya hassleriana HOM05D006354 ORTHO05D007773 8.6e-61 237.7 276 49.3
COL.COLO4_17142 Corchorus olitorius HOM05D006354 ORTHO05D007773 1.5e-60 236.9 270 51.1
ECA238G1940 Erigeron canadensis HOM05D006354 ORTHO05D007773 1.5e-60 236.9 276 47.8
Lj3g0014698 Lotus japonicus HOM05D006354 ORTHO05D007773 1.9e-60 236.5 276 50.4
Medtr2g096880 Medicago truncatula HOM05D006354 ORTHO05D007773 1.9e-60 236.5 276 49.6
Ciclev10028134m.g Citrus clementina HOM05D006354 ORTHO05D007773 2.5e-60 236.1 274 49.6
PSO151G0044 Papaver somniferum HOM05D006354 ORTHO05D007773 3.3e-60 235.7 276 49.6
Psat5g284560 Pisum sativum HOM05D006354 ORTHO05D007773 7.3e-60 234.6 276 49.3
TAR633G1968 Trochodendron aralioides HOM05D006354 ORTHO05D007773 7.3e-60 234.6 268 51.9
Gohir.D07G102700 Gossypium hirsutum HOM05D006354 ORTHO05D007773 9.5e-60 234.2 274 48.9
Gorai.001G110600 Gossypium raimondii HOM05D006354 ORTHO05D007773 9.5e-60 234.2 274 48.9
PSO339G2149 Papaver somniferum HOM05D006354 ORTHO05D007773 1.2e-59 233.8 276 48.9
arahy.Tifrunner.gnm1.ann1.J6ZHUK Arachis hypogaea HOM05D006354 ORTHO05D007773 1.6e-59 233.4 267 51.3
Thhalv10007326m.g Eutrema salsugineum HOM05D006354 ORTHO05D007773 1.6e-59 233.4 274 46.4
Eucgr.H04667 Eucalyptus grandis HOM05D006354 ORTHO05D007773 2.1e-59 233.0 272 50.4
Gohir.A07G098400 Gossypium hirsutum HOM05D006354 ORTHO05D007773 2.1e-59 233.0 274 48.2
TPR.G34321 Trifolium pratense HOM05D006354 ORTHO05D007773 2.8e-59 232.6 276 49.3
MD11G1109000 Malus domestica HOM05D006354 ORTHO05D007773 3.6e-59 232.3 271 49.8
Atru.BG.120.p Acer truncatum HOM05D006354 ORTHO05D007773 2.3e-58 229.6 273 50.5
GSVIVG01024964001 Vitis vinifera HOM05D006354 ORTHO05D007773 2.3e-58 229.6 221 59.3
MBI16_g39932_MAGBIO Magnolia biondii HOM05D006354 ORTHO05D007773 3.0e-58 229.2 276 48.2
EL10Ac7g16019 Beta vulgaris HOM05D006354 ORTHO05D007773 4.0e-58 228.8 260 51.2
Sed0003888 Sechium edule HOM05D006354 ORTHO05D007773 5.2e-58 228.4 275 48.0
AL1G17770 Arabidopsis lyrata HOM05D006354 ORTHO05D007773 6.8e-58 228.0 274 45.3
AT1G07590 Arabidopsis thaliana HOM05D006354 ORTHO05D007773 1.5e-57 226.9 274 47.1
BcaC07g42486 Brassica carinata HOM05D006354 ORTHO05D007773 1.5e-57 226.9 276 44.9
VMungo1080G0880 Vigna mungo HOM05D006354 ORTHO05D007773 1.5e-57 226.9 263 51.3
CARHR007380 Cardamine hirsuta HOM05D006354 ORTHO05D007773 2.6e-57 226.1 274 45.6
Glyma.13G336000 Glycine max HOM05D006354 ORTHO05D007773 2.6e-57 226.1 264 51.1
Sed0005059 Sechium edule HOM05D006354 ORTHO05D007773 2.6e-57 226.1 277 48.0
Aa31sc13G80 Aethionema arabicum HOM05D006354 ORTHO05D007773 3.4e-57 225.7 274 46.0
Carub.0001s0691 Capsella rubella HOM05D006354 ORTHO05D007773 3.4e-57 225.7 274 46.4
Sp1g06320 Schrenkiella parvula HOM05D006354 ORTHO05D007773 2.2e-56 223.0 274 44.9
BcaC07g41984 Brassica carinata HOM05D006354 ORTHO05D007773 2.9e-56 222.6 274 44.2
A09p66280 Brassica napus HOM05D006354 ORTHO05D007773 2.9e-56 222.6 274 44.2
C08p50450 Brassica napus HOM05D006354 ORTHO05D007773 2.9e-56 222.6 274 44.2
BolC8t52573H Brassica oleracea HOM05D006354 ORTHO05D007773 2.9e-56 222.6 274 44.2
Aqoxy455s003 Aquilegia oxysepala HOM05D006354 ORTHO05D007773 6.4e-56 221.5 276 46.7
Lsat_1_v5_gn_9_23500 Lactuca sativa HOM05D006354 ORTHO05D007773 4.1e-55 218.8 274 44.5
Nn5g26915 Nelumbo nucifera HOM05D006354 ORTHO05D007773 7.0e-55 218.0 258 49.2
BraA09t41965Z Brassica rapa HOM05D006354 ORTHO05D007773 1.2e-54 217.2 274 43.4
ATR0827G002 Amborella trichopoda HOM05D006354 ORTHO05D007773 2.5e-52 209.5 276 43.5
SHI07598 Sapria himalayana HOM05D006354 ORTHO05D007773 2.2e-48 196.4 275 43.3
Aqoxy2G02124 Aquilegia oxysepala HOM05D006354 ORTHO05D007773 3.7e-48 195.7 259 45.2
AUR62009573 Chenopodium quinoa HOM05D006354 ORTHO05D007773 1.2e-46 190.7 242 47.5
HPP92_025528 Vanilla planifolia HOM05D006354 ORTHO05D007773 5.6e-44 181.8 253 42.7
HPP92_025507 Vanilla planifolia HOM05D006354 ORTHO05D007773 2.8e-43 179.5 254 42.5
Nitab4.5_0002726g0010 Nicotiana tabacum HOM05D004808 ORTHO05D007773 6.2e-43 178.3 226 46.9
Ca_01327_v3 Cicer arietinum L. HOM05D006354 ORTHO05D007773 2.0e-41 173.3 276 40.6
MBI16_g22330_MAGBIO Magnolia biondii HOM05D006354 ORTHO05D007773 5.4e-39 165.2 239 43.5
CDE06G0212 Ceratophyllum demersum HOM05D006354 ORTHO05D007773 1.1e-36 157.5 212 44.3
CDE06G1477 Ceratophyllum demersum HOM05D006354 ORTHO05D007773 6.9e-26 121.7 236 36.0
CSS0033643 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 2.7e-14 83.2 54 77.8
FAN25G3661 Fragaria x ananassa HOM05D006354 ORTHO05D007773 9.6e-12 74.7 71 56.3
Pp3c21_11730 Physcomitrium patens HOM05D000300 ORTHO05D002838 1.4e-10 70.9 186 26.3
Zm00001eb415510 Zea mays HOM05D006354 ORTHO05D007773 9.0e-10 68.2 98 41.8
Pp3c18_8600 Physcomitrium patens HOM05D000300 ORTHO05D002838 7.1e-07 58.5 81 35.8
Migut.J01647 Erythranthe guttata HOM05D002649 ORTHO05D002838 1.2e-06 57.8 265 25.7
Phvul.007G280400 Phaseolus vulgaris HOM05D002649 ORTHO05D002838 1.2e-06 57.8 214 26.2
Lalb_Chr14g0365771 Lupinus albus HOM05D002649 ORTHO05D002838 7.9e-06 55.1 184 27.2
SalBow1G2416 Salvia bowleyana HOM05D002649 ORTHO05D002838 7.9e-06 55.1 96 33.3


User provided reference genes

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