Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.4e-78 296.2 152 100.0
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 6.5e-39 164.5 91 97.8
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 5.3e-33 144.8 105 70.5
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 5.0e-31 138.3 97 75.3
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 6.5e-31 137.9 96 76.0
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 1.1e-30 137.1 96 76.0
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.1e-30 137.1 91 80.2
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.1e-30 137.1 91 78.0
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.2e-29 133.7 93 75.3
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 3.6e-29 132.1 91 75.8
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 4.7e-29 131.7 91 74.7
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 6.1e-29 131.3 94 70.2
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 6.1e-29 131.3 94 70.2
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 6.1e-29 131.3 89 77.5
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 6.1e-29 131.3 89 77.5
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.4e-28 130.2 95 72.6
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 1.4e-28 130.2 93 74.2
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 2.3e-28 129.4 94 69.1
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 3.0e-28 129.0 98 70.4
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 4.0e-28 128.6 88 78.4
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 8.8e-28 127.5 91 73.6
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 8.8e-28 127.5 96 69.8
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 1.5e-27 126.7 91 74.7
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 1.5e-27 126.7 91 72.5
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 1.5e-27 126.7 94 71.3
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 2.0e-27 126.3 98 69.4
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 2.6e-27 125.9 91 71.4
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 4.4e-27 125.2 87 75.9
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 4.4e-27 125.2 94 72.3
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 5.7e-27 124.8 93 67.7
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 5.7e-27 124.8 93 72.0
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 5.7e-27 124.8 96 68.8
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 7.5e-27 124.4 93 71.0
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 9.8e-27 124.0 89 74.2
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 9.8e-27 124.0 94 66.0
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 1.3e-26 123.6 91 70.3
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.3e-26 123.6 91 70.3
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.3e-26 123.6 91 70.3
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 1.3e-26 123.6 91 71.4
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 2.2e-26 122.9 96 64.6
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 2.2e-26 122.9 87 72.4
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 2.8e-26 122.5 91 69.2
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 2.8e-26 122.5 91 69.2
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 3.7e-26 122.1 85 76.5
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 3.7e-26 122.1 93 68.8
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 3.7e-26 122.1 93 66.7
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 4.8e-26 121.7 93 67.7
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 6.3e-26 121.3 89 74.2
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 8.3e-26 120.9 91 68.1
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 8.3e-26 120.9 93 67.7
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.1e-25 120.6 91 69.2
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 1.4e-25 120.2 94 69.1
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.4e-25 120.2 91 69.2
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 1.8e-25 119.8 101 65.3
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 2.4e-25 119.4 96 68.8
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.4e-25 119.4 92 68.5
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 2.4e-25 119.4 94 68.1
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 3.1e-25 119.0 91 69.2
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 4.1e-25 118.6 105 62.9
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 7.0e-25 117.9 92 68.5
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 7.0e-25 117.9 93 67.7
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 1.6e-24 116.7 92 66.3
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 2.0e-24 116.3 94 63.8
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 2.0e-24 116.3 85 72.9
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 2.7e-24 115.9 91 69.2
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 3.5e-24 115.5 95 66.3
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 4.5e-24 115.2 93 66.7
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 4.5e-24 115.2 102 60.8
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 7.7e-24 114.4 91 65.9
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 7.7e-24 114.4 91 65.9
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 7.7e-24 114.4 84 72.6
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 2.9e-23 112.5 90 68.9
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.1e-22 110.5 91 64.8
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 3.2e-22 109.0 94 60.6
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 3.2e-22 109.0 113 53.1
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 3.2e-22 109.0 98 54.1
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 5.5e-22 108.2 95 58.9
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 1.4e-20 103.6 98 54.1
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 8.8e-20 100.9 76 71.1
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 2.6e-19 99.4 98 50.0
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 3.4e-19 99.0 86 64.0
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 9.8e-19 97.4 85 62.4
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 1.7e-18 96.7 84 57.1
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 4.9e-18 95.1 93 51.6
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 3.1e-17 92.4 93 49.5
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 2.0e-16 89.7 68 72.1
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 3.5e-16 89.0 93 48.4
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 5.9e-16 88.2 93 49.5
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 5.9e-16 88.2 93 49.5
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 7.8e-16 87.8 85 55.3
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 1.3e-15 87.0 93 48.4
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 6.6e-15 84.7 93 47.3
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 6.6e-15 84.7 93 47.3
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 8.6e-15 84.3 92 54.3
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 4.7e-13 78.6 79 57.0
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.4e-12 77.0 91 42.9
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.9e-10 69.3 77 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 6.4e-10 68.2 74 50.0
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 2.3e-07 59.7 88 40.9


User provided reference genes

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