Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032342 Camellia sinensis var. sinensis HOM05D004906 ORTHO05D005926 1.0e-119 433.3 209 100.0
CSS0023910 Camellia sinensis var. sinensis HOM05D004906 ORTHO05D005926 3.2e-36 156.0 134 60.4
TAR623G1747 Trochodendron aralioides HOM05D004906 ORTHO05D005926 3.5e-35 152.5 131 60.3
Aqoxy1G00419 Aquilegia oxysepala HOM05D004906 ORTHO05D005926 7.8e-35 151.4 131 61.1
PSO782G1935 Papaver somniferum HOM05D004906 ORTHO05D005926 7.8e-35 151.4 131 59.5
PSO566G0107 Papaver somniferum HOM05D004906 ORTHO05D005926 1.0e-34 151.0 131 58.8
Cfa009918 Carpinus fangiana HOM05D004906 ORTHO05D005926 3.9e-34 149.1 131 58.8
Haze_23276 Corylus avellana HOM05D004906 ORTHO05D005926 3.9e-34 149.1 131 58.8
Nn5g28862 Nelumbo nucifera HOM05D004906 ORTHO05D005926 5.1e-34 148.7 131 58.8
Actinidia06985 Actinidia chinensis HOM05D004906 ORTHO05D005926 6.6e-34 148.3 131 59.5
CsaV3_6G038760 Cucumis sativus L. HOM05D004906 ORTHO05D005926 6.6e-34 148.3 131 57.3
CiPaw.14G109800 Carya illinoinensis HOM05D004906 ORTHO05D005926 8.7e-34 147.9 131 57.3
ClCG02G022640 Citrullus lanatus HOM05D004906 ORTHO05D005926 1.9e-33 146.7 145 52.4
Sc09g0001150 Simmondsia chinensis HOM05D004906 ORTHO05D005926 2.5e-33 146.4 131 58.0
Hma1.2p1_0811F.1_g222140 Hydrangea macrophylla HOM05D004906 ORTHO05D005926 4.3e-33 145.6 131 57.3
Lj4A832T45 Lonicera japonica HOM05D004906 ORTHO05D005926 4.3e-33 145.6 131 56.5
TWI79G0625 Tripterygium wilfordii HOM05D004906 ORTHO05D005926 4.3e-33 145.6 131 56.5
Cpa.g.sc34.192 Carica papaya HOM05D004906 ORTHO05D005926 5.6e-33 145.2 131 55.7
GSVIVG01000077001 Vitis vinifera HOM05D004906 ORTHO05D005926 5.6e-33 145.2 131 58.0
Potri.001G272400 Populus trichocarpa HOM05D004906 ORTHO05D005926 1.3e-32 144.1 131 56.5
SalBow6G0163 Salvia bowleyana HOM05D004906 ORTHO05D005926 1.3e-32 144.1 131 57.3
TWI31G0720 Tripterygium wilfordii HOM05D004906 ORTHO05D005926 1.3e-32 144.1 131 55.7
Sabra16G0167700 Salix brachista HOM05D004906 ORTHO05D005926 2.1e-32 143.3 131 55.7
Ah.06g194850 Amaranthus hybridus HOM05D004906 ORTHO05D005926 2.8e-32 142.9 131 56.5
CiPaw.13G147500 Carya illinoinensis HOM05D004906 ORTHO05D005926 2.8e-32 142.9 131 56.5
Lj6C105G1 Lonicera japonica HOM05D004906 ORTHO05D005926 2.8e-32 142.9 131 55.0
Prupe.1G051200 Prunus persica HOM05D004906 ORTHO05D005926 4.8e-32 142.1 131 56.5
Rhsim13G0204200 Rhododendron simsii HOM05D004906 ORTHO05D005926 4.8e-32 142.1 131 57.3
Ca_23430_v3 Cicer arietinum L. HOM05D004906 ORTHO05D005926 6.2e-32 141.7 131 55.0
Lsat_1_v5_gn_3_117120 Lactuca sativa HOM05D004906 ORTHO05D005926 6.2e-32 141.7 131 55.0
MD10G1340300 Malus domestica HOM05D004906 ORTHO05D005926 6.2e-32 141.7 131 56.5
MD13G1224600 Malus domestica HOM05D004906 ORTHO05D005926 6.2e-32 141.7 131 55.7
Psat4g165720 Pisum sativum HOM05D004906 ORTHO05D005926 6.2e-32 141.7 131 55.0
RcHm_v2.0_Chr1g0336841 Rosa chinensis HOM05D004906 ORTHO05D005926 6.2e-32 141.7 131 57.3
Atru.chr12.1308 Acer truncatum HOM05D004906 ORTHO05D005926 1.1e-31 141.0 131 56.5
Lalb_Chr17g0343281 Lupinus albus HOM05D004906 ORTHO05D005926 1.1e-31 141.0 131 55.0
MSTRG.12434 Avicennia marina HOM05D004906 ORTHO05D005926 1.4e-31 140.6 131 54.2
Potri.009G066900 Populus trichocarpa HOM05D004906 ORTHO05D005926 1.4e-31 140.6 131 55.7
EL10Ac4g10081 Beta vulgaris HOM05D004906 ORTHO05D005926 1.8e-31 140.2 131 56.5
Lj3g0015121 Lotus japonicus HOM05D004906 ORTHO05D005926 1.8e-31 140.2 131 54.2
Medtr8g023050 Medicago truncatula HOM05D004906 ORTHO05D005926 1.8e-31 140.2 131 54.2
QL01p016300 Quercus lobata HOM05D004906 ORTHO05D005926 2.4e-31 139.8 131 54.2
Duzib150G1150 Durio zibethinus HOM05D004906 ORTHO05D005926 3.1e-31 139.4 131 55.7
CANSAT54G2831 Cannabis sativa HOM05D004906 ORTHO05D005926 4.0e-31 139.0 131 55.0
Sabra09G0049800 Salix brachista HOM05D004906 ORTHO05D005926 4.0e-31 139.0 131 55.0
Glyma.07G045400 Glycine max HOM05D004906 ORTHO05D005926 5.3e-31 138.7 131 54.2
Nitab4.5_0002026g0120 Nicotiana tabacum HOM05D004906 ORTHO05D005926 5.3e-31 138.7 131 54.2
Sed0008510 Sechium edule HOM05D004906 ORTHO05D005926 5.3e-31 138.7 131 55.0
DCAR_031616 Daucus carota HOM05D004906 ORTHO05D005926 6.9e-31 138.3 131 55.0
FvH4_5g29830 Fragaria vesca HOM05D004906 ORTHO05D005926 6.9e-31 138.3 131 55.7
FAN13G0138 Fragaria x ananassa HOM05D004906 ORTHO05D005926 6.9e-31 138.3 131 55.7
Oeu025917.1 Olea europaea HOM05D004906 ORTHO05D005926 6.9e-31 138.3 131 53.4
RcHm_v2.0_Chr7g0223431 Rosa chinensis HOM05D004906 ORTHO05D005926 6.9e-31 138.3 131 55.7
PGSC0003DMG400032507 Solanum tuberosum HOM05D004906 ORTHO05D005926 6.9e-31 138.3 131 53.4
CDE08G1453 Ceratophyllum demersum HOM05D004906 ORTHO05D005926 9.0e-31 137.9 131 55.7
FAN03G0457 Fragaria x ananassa HOM05D004906 ORTHO05D005926 9.0e-31 137.9 131 55.7
FAN06G2810 Fragaria x ananassa HOM05D004906 ORTHO05D005926 9.0e-31 137.9 131 55.7
Hund07413 Selenicereus undatus HOM05D004906 ORTHO05D005926 9.0e-31 137.9 131 55.7
TPR.G18167 Trifolium pratense HOM05D004906 ORTHO05D005926 1.2e-30 137.5 129 54.3
VMungo0540G0727 Vigna mungo HOM05D004906 ORTHO05D005926 2.0e-30 136.7 131 52.7
Migut.N02385 Erythranthe guttata HOM05D004906 ORTHO05D005926 2.6e-30 136.3 123 56.1
HanXRQChr03g0091561 Helianthus annuus HOM05D004906 ORTHO05D005926 2.6e-30 136.3 131 52.7
Manes.14G139200 Manihot esculenta HOM05D004906 ORTHO05D005926 2.6e-30 136.3 131 52.7
PGR102G2398 Punica granatum HOM05D004906 ORTHO05D005926 2.6e-30 136.3 131 52.7
Solyc11g062360.2 Solanum lycopersicum HOM05D004906 ORTHO05D005926 2.6e-30 136.3 131 53.4
Sopen11g024360 Solanum pennellii HOM05D004906 ORTHO05D005926 2.6e-30 136.3 131 53.4
MELO3C014538.2 Cucumis melo HOM05D004906 ORTHO05D005926 4.5e-30 135.6 75 82.7
Thecc.09G253700 Theobroma cacao HOM05D004906 ORTHO05D005926 4.5e-30 135.6 131 53.4
Gohir.A05G072500 Gossypium hirsutum HOM05D004906 ORTHO05D005926 9.9e-30 134.4 131 52.7
Gohir.D05G075300 Gossypium hirsutum HOM05D004906 ORTHO05D005926 9.9e-30 134.4 131 52.7
Gorai.009G076700 Gossypium raimondii HOM05D004906 ORTHO05D005926 9.9e-30 134.4 131 52.7
Peaxi162Scf00029g02411 Petunia axillaris HOM05D004906 ORTHO05D005926 1.3e-29 134.0 131 52.7
SGA_v2.0_scaffold3G01435 Striga asiatica HOM05D004906 ORTHO05D005926 1.3e-29 134.0 131 51.9
unitig_699.g19150 Utricularia gibba HOM05D004906 ORTHO05D005926 1.3e-29 134.0 131 51.9
arahy.Tifrunner.gnm1.ann1.7BKA07 Arachis hypogaea HOM05D004906 ORTHO05D005926 1.7e-29 133.7 131 52.7
FAN08G1833 Fragaria x ananassa HOM05D004906 ORTHO05D005926 1.7e-29 133.7 131 54.2
Ciclev10014615m.g Citrus clementina HOM05D004906 ORTHO05D005926 2.9e-29 132.9 132 54.5
ECA240G3817 Erigeron canadensis HOM05D004906 ORTHO05D005926 2.9e-29 132.9 131 51.1
Nitab4.5_0000492g0170 Nicotiana tabacum HOM05D004906 ORTHO05D005926 2.9e-29 132.9 131 51.9
arahy.Tifrunner.gnm1.ann1.4M7FUH Arachis hypogaea HOM05D004906 ORTHO05D005926 3.8e-29 132.5 129 52.7
arahy.Tifrunner.gnm1.ann1.U80ME1 Arachis hypogaea HOM05D004906 ORTHO05D005926 3.8e-29 132.5 129 52.7
A10p25530 Brassica napus HOM05D004906 ORTHO05D005926 3.8e-29 132.5 131 52.7
BraA10t44617Z Brassica rapa HOM05D004906 ORTHO05D005926 3.8e-29 132.5 131 52.7
Thhalv10028084m.g Eutrema salsugineum HOM05D004906 ORTHO05D005926 4.9e-29 132.1 131 52.7
THA.LOC104811206 Tarenaya hassleriana HOM05D004906 ORTHO05D005926 4.9e-29 132.1 131 52.7
Cc01_g06610 Coffea canephora HOM05D004906 ORTHO05D005926 8.4e-29 131.3 131 51.9
ECA240G2886 Erigeron canadensis HOM05D004906 ORTHO05D005926 8.4e-29 131.3 131 51.9
Eucgr.J00670 Eucalyptus grandis HOM05D004906 ORTHO05D005926 8.4e-29 131.3 131 49.6
FAN10G0972 Fragaria x ananassa HOM05D004906 ORTHO05D005926 1.1e-28 131.0 131 53.4
C09p64610 Brassica napus HOM05D004906 ORTHO05D005926 1.4e-28 130.6 131 51.9
BolC9t59294H Brassica oleracea HOM05D004906 ORTHO05D005926 1.4e-28 130.6 131 51.9
Oeu061691.1 Olea europaea HOM05D004906 ORTHO05D005926 1.4e-28 130.6 132 53.0
Carub.0006s1077 Capsella rubella HOM05D004906 ORTHO05D005926 2.4e-28 129.8 131 51.1
Sp6g31380 Schrenkiella parvula HOM05D004906 ORTHO05D005926 5.4e-28 128.6 131 52.7
Thhalv10012969m.g Eutrema salsugineum HOM05D004906 ORTHO05D005926 7.1e-28 128.3 131 51.9
AL6G23070 Arabidopsis lyrata HOM05D004906 ORTHO05D005926 9.3e-28 127.9 131 52.7
Aa31LG3G14960 Aethionema arabicum HOM05D004906 ORTHO05D005926 1.6e-27 127.1 131 51.9
AT5G12260 Arabidopsis thaliana HOM05D004906 ORTHO05D005926 1.6e-27 127.1 131 51.9
SEGI_13581 Sequoiadendron giganteum HOM05D004906 ORTHO05D005926 2.1e-27 126.7 131 50.4
ATR0745G074 Amborella trichopoda HOM05D004906 ORTHO05D005926 3.5e-27 125.9 131 50.4
BcaB01g05413 Brassica carinata HOM05D004906 ORTHO05D005926 3.5e-27 125.9 131 50.4
Sp6g31370 Schrenkiella parvula HOM05D004906 ORTHO05D005926 4.6e-27 125.6 131 50.4
MBI13_g07374_MAGBIO Magnolia biondii HOM05D004906 ORTHO05D005926 6.0e-27 125.2 75 74.7
A03p05500 Brassica napus HOM05D004906 ORTHO05D005926 7.9e-27 124.8 131 50.4
BraA03t09888Z Brassica rapa HOM05D004906 ORTHO05D005926 7.9e-27 124.8 131 50.4
HPP92_025126 Vanilla planifolia HOM05D004906 ORTHO05D005926 1.0e-26 124.4 131 48.9
Zm00001eb129370 Zea mays HOM05D004906 ORTHO05D005926 1.0e-26 124.4 131 47.3
Os01g0283000 Oryza sativa ssp. japonica HOM05D004906 ORTHO05D005926 1.3e-26 124.0 131 47.3
FAN18G3162 Fragaria x ananassa HOM05D004906 ORTHO05D005926 1.8e-26 123.6 131 51.1
COL.COLO4_06626 Corchorus olitorius HOM05D004906 ORTHO05D005926 3.9e-26 122.5 119 52.9
AUR62000224 Chenopodium quinoa HOM05D004906 ORTHO05D005926 6.7e-26 121.7 134 50.0
AUR62006570 Chenopodium quinoa HOM05D004906 ORTHO05D005926 1.1e-25 120.9 121 52.1
CARHR200850 Cardamine hirsuta HOM05D004906 ORTHO05D005926 1.9e-25 120.2 75 73.3
MD13G1224500 Malus domestica HOM05D004906 ORTHO05D005926 1.9e-25 120.2 71 76.1
SMO358G0189 Selaginella moellendorffii HOM05D004906 ORTHO05D005926 2.5e-25 119.8 131 45.8
FAN01G2262 Fragaria x ananassa HOM05D004906 ORTHO05D005926 9.6e-25 117.9 74 73.0
SHI24959 Sapria himalayana HOM05D004906 ORTHO05D005926 3.7e-24 115.9 131 45.8
C03p06420 Brassica napus HOM05D004906 ORTHO05D005926 8.1e-24 114.8 75 72.0
Pp3c3_19100 Physcomitrium patens HOM05D004906 ORTHO05D005926 5.8e-22 108.6 131 43.5
Mapoly0001s0235 Marchantia polymorpha HOM05D004906 ORTHO05D005926 5.5e-20 102.1 125 39.2
SGA_v2.0_scaffold26G11394 Striga asiatica HOM05D004906 ORTHO05D005926 9.7e-09 64.7 93 38.7
Atru.chr3.2838 Acer truncatum HOM05D004906 ORTHO05D005926 2.8e-08 63.2 76 47.4
BolC3t13147H Brassica oleracea HOM05D004906 ORTHO05D005926 9.0e-07 58.2 32 75.0


User provided reference genes

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