Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032310 Camellia sinensis var. sinensis HOM05D000999 ORTHO05D030954 1.6e-55 219.2 112 100.0
Dinv24210 Davidia involucrata HOM05D000999 ORTHO05D000961 1.6e-21 106.3 114 59.6
TAR628G0050 Trochodendron aralioides HOM05D000999 ORTHO05D000961 1.4e-17 93.2 109 53.2
TAR628G0525 Trochodendron aralioides HOM05D000999 ORTHO05D000961 1.4e-17 93.2 109 53.2
TAR628G1736 Trochodendron aralioides HOM05D000999 ORTHO05D000961 1.4e-17 93.2 109 53.2
Hma1.2p1_0217F.1_g091800 Hydrangea macrophylla HOM05D000999 ORTHO05D000961 2.3e-17 92.4 110 58.2
TAR628G0651 Trochodendron aralioides HOM05D000999 ORTHO05D000961 4.0e-17 91.7 106 55.7
TAR625G0965 Trochodendron aralioides HOM05D000999 ORTHO05D000961 2.0e-16 89.4 115 48.7
Nn5g29010 Nelumbo nucifera HOM05D000999 ORTHO05D000961 1.1e-14 83.6 111 47.7
vmacro01814 Vaccinium macrocarpon HOM05D000999 ORTHO05D000961 3.1e-14 82.0 132 50.0
Nn1g05252 Nelumbo nucifera HOM05D000999 ORTHO05D000961 5.9e-13 77.8 115 45.2
Thecc.02G142500 Theobroma cacao HOM05D000999 ORTHO05D000961 1.3e-12 76.6 98 46.9
MBI02_g20370_MAGBIO Magnolia biondii HOM05D000999 ORTHO05D000961 5.0e-12 74.7 101 47.5
COL.COLO4_33877 Corchorus olitorius HOM05D000999 ORTHO05D000961 6.5e-12 74.3 103 46.6
arahy.Tifrunner.gnm1.ann1.7QC42K Arachis hypogaea HOM05D000999 ORTHO05D000961 5.5e-11 71.2 118 44.9
arahy.Tifrunner.gnm1.ann1.AU7TPI Arachis hypogaea HOM05D000999 ORTHO05D000961 7.2e-11 70.9 118 44.9
Duzib248G0054 Durio zibethinus HOM05D000999 ORTHO05D000961 2.1e-10 69.3 94 43.6
Rhsim11G0135300 Rhododendron simsii HOM05D000999 ORTHO05D000961 2.1e-10 69.3 117 44.4
Haze_10634 Corylus avellana HOM05D000999 ORTHO05D000961 4.7e-10 68.2 115 43.5
Gorai.008G014900 Gossypium raimondii HOM05D000999 ORTHO05D000961 6.1e-10 67.8 101 46.5
Actinidia00256 Actinidia chinensis HOM05D000999 ORTHO05D000961 8.0e-10 67.4 105 42.9
Gohir.A12G014200 Gossypium hirsutum HOM05D000999 ORTHO05D000961 8.0e-10 67.4 101 46.5
Lj6g0021802 Lotus japonicus HOM05D000999 ORTHO05D000961 1.8e-09 66.2 118 39.8
Gohir.D12G014800 Gossypium hirsutum HOM05D000999 ORTHO05D000961 3.0e-09 65.5 101 45.5
Manes.06G009700 Manihot esculenta HOM05D000999 ORTHO05D000961 3.0e-09 65.5 127 40.9
CiPaw.05G038300 Carya illinoinensis HOM05D000999 ORTHO05D000961 6.8e-09 64.3 115 40.9
PGR142G1074 Punica granatum HOM05D000999 ORTHO05D000961 6.8e-09 64.3 109 40.4
Atru.chr6.937 Acer truncatum HOM05D000999 ORTHO05D000961 1.5e-08 63.2 101 46.5
GSVIVG01029765001 Vitis vinifera HOM05D000999 ORTHO05D000961 1.5e-08 63.2 108 42.6
Eucgr.I02688 Eucalyptus grandis HOM05D000999 ORTHO05D000961 4.4e-08 61.6 98 43.9
SGA_v2.0_scaffold332G48951 Striga asiatica HOM05D000999 ORTHO05D000961 4.4e-08 61.6 114 40.4
Cc02_g21770 Coffea canephora HOM05D000999 ORTHO05D000961 5.7e-08 61.2 102 40.2
TAR628G1184 Trochodendron aralioides HOM05D000386 ORTHO05D030954 5.7e-08 61.2 47 66.0
CiPaw.06G151900 Carya illinoinensis HOM05D000999 ORTHO05D000961 1.3e-07 60.1 121 41.3
MSTRG.27787 Avicennia marina HOM05D000999 ORTHO05D000961 1.7e-07 59.7 99 40.4
Aqoxy6G00556 Aquilegia oxysepala HOM05D000999 ORTHO05D000961 2.8e-07 58.9 106 41.5
FAN13G0105 Fragaria x ananassa HOM05D000999 ORTHO05D000961 4.8e-07 58.2 125 37.6
FAN08G3513 Fragaria x ananassa HOM05D000999 ORTHO05D000961 8.3e-07 57.4 125 38.4
RcHm_v2.0_Chr7g0226171 Rosa chinensis HOM05D000999 ORTHO05D000961 8.3e-07 57.4 126 38.9
QL11p019480 Quercus lobata HOM05D000999 ORTHO05D000961 1.1e-06 57.0 113 39.8
VMungo0251G0877 Vigna mungo HOM05D000999 ORTHO05D000961 1.1e-06 57.0 113 39.8
CDE03G0207 Ceratophyllum demersum HOM05D000999 ORTHO05D000961 3.1e-06 55.5 95 37.9
Phvul.002G207200 Phaseolus vulgaris HOM05D000999 ORTHO05D000961 3.1e-06 55.5 113 41.6
Gohir.A03G172300 Gossypium hirsutum HOM05D000999 ORTHO05D000961 4.1e-06 55.1 103 36.9
MSTRG.16570 Avicennia marina HOM05D000999 ORTHO05D000961 7.0e-06 54.3 109 37.6


User provided reference genes

Program Settings