Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032286 Camellia sinensis var. sinensis HOM05D032456 ORTHO05D110395 8.3e-34 146.4 69 100.0
CSS0038497 Camellia sinensis var. sinensis HOM05D032456 ORTHO05D111136 3.9e-23 110.9 66 80.3
CSS0006126 Camellia sinensis var. sinensis HOM05D032456 ORTHO05D112149 4.9e-18 94.0 87 59.8
CSS0030828 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 3.5e-08 61.2 38 71.1
CSS0033161 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 3.5e-08 61.2 38 71.1
CSS0016797 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 3.9e-07 57.8 34 76.5
CSS0018877 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 3.9e-07 57.8 34 76.5
CSS0047496 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 3.9e-07 57.8 34 76.5
CSS0000736 Camellia sinensis var. sinensis HOM05D004338 ORTHO05D005205 2.5e-06 55.1 34 73.5
Cpa.g.sc159.8 Carica papaya HOM05D000434 ORTHO05D001445 3.3e-06 54.7 41 58.5
Ah.08g218680 Amaranthus hybridus HOM05D000434 ORTHO05D001445 4.3e-06 54.3 38 60.5
Hma1.2p1_1092F.1_g255920 Hydrangea macrophylla HOM05D000434 ORTHO05D001445 4.3e-06 54.3 43 58.1
Dinv38517 Davidia involucrata HOM05D000434 ORTHO05D001445 7.4e-06 53.5 38 60.5
THA.LOC104822549 Tarenaya hassleriana HOM05D000434 ORTHO05D001445 7.4e-06 53.5 38 63.2


User provided reference genes

Program Settings