Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 5.8e-30 133.7 71 100.0
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.1e-25 119.4 69 92.8
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.1e-17 92.8 67 70.1
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 1.5e-17 92.4 67 71.6
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.5e-17 92.4 67 71.6
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.5e-17 92.4 67 73.1
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.5e-17 91.7 67 70.1
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 2.5e-17 91.7 67 70.1
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 4.3e-17 90.9 67 70.1
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 7.3e-17 90.1 67 71.6
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.2e-16 89.4 67 68.7
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 1.2e-16 89.4 67 67.2
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 2.8e-16 88.2 67 65.7
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 3.6e-16 87.8 59 71.2
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 8.1e-16 86.7 67 62.7
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 1.4e-15 85.9 67 64.2
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 1.8e-15 85.5 62 64.5
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.3e-15 85.1 67 65.7
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 3.1e-15 84.7 59 69.5
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.1e-15 84.7 67 64.2
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 4.0e-15 84.3 63 66.7
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 4.0e-15 84.3 67 62.7
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 6.8e-15 83.6 62 61.3
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 8.9e-15 83.2 67 64.2
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 1.2e-14 82.8 67 62.7
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 1.5e-14 82.4 67 64.2
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 7.5e-14 80.1 62 64.5
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 7.5e-14 80.1 71 56.3
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.3e-13 79.3 59 67.8
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 1.7e-13 79.0 62 61.3
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 1.7e-13 79.0 62 61.3
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 2.2e-13 78.6 67 56.7
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 2.9e-13 78.2 67 56.7
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 3.7e-13 77.8 68 58.8
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 3.7e-13 77.8 67 56.7
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 6.4e-13 77.0 67 59.7
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 1.1e-12 76.3 67 56.7
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.4e-12 75.9 67 59.7
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.4e-12 75.9 66 59.1
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 1.4e-12 75.9 61 62.3
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.9e-12 75.5 62 58.1
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 3.2e-12 74.7 61 60.7
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.1e-12 74.3 67 58.2
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 4.1e-12 74.3 61 59.0
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 4.1e-12 74.3 69 56.5
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 7.1e-12 73.6 67 59.7
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 9.2e-12 73.2 61 57.4
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.1e-11 72.0 72 55.6
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.1e-11 72.0 67 55.2
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 2.1e-11 72.0 67 55.2
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 2.7e-11 71.6 61 57.4
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.5e-11 71.2 65 58.5
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 3.5e-11 71.2 58 60.3
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 4.6e-11 70.9 61 55.7
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 6.0e-11 70.5 71 62.0
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 7.8e-11 70.1 67 53.7
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 1.0e-10 69.7 64 57.8
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 1.3e-10 69.3 61 59.0
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 1.7e-10 68.9 62 56.5
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 2.3e-10 68.6 63 55.6
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 3.0e-10 68.2 61 55.7
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 5.1e-10 67.4 67 50.7
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 5.1e-10 67.4 62 58.1
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 5.1e-10 67.4 62 58.1
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 5.1e-10 67.4 66 51.5
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 6.6e-10 67.0 51 60.8
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 8.6e-10 66.6 62 56.5
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 8.6e-10 66.6 72 52.8
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 1.1e-09 66.2 59 57.6
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 1.9e-09 65.5 63 52.4
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 2.5e-09 65.1 63 55.6
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 9.5e-09 63.2 61 52.5
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 2.1e-08 62.0 67 49.3
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 8.1e-08 60.1 61 50.8
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 1.4e-07 59.3 68 52.9
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 3.1e-07 58.2 66 45.5
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 4.0e-07 57.8 62 46.8
Medtr6g086730 Medicago truncatula HOM05D007950 ORTHO05D009951 6.8e-07 57.0 53 50.9


User provided reference genes

Program Settings