Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.3e-61 240.0 158 100.0
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.3e-61 240.0 158 100.0
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 8.5e-42 174.1 161 80.7
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 4.9e-37 158.3 166 77.1
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 3.3e-33 145.6 219 57.5
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 3.3e-33 145.6 166 71.1
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.6e-32 143.3 165 71.5
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 2.2e-29 132.9 162 69.8
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 4.9e-29 131.7 142 73.2
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 1.4e-28 130.2 155 67.7
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 3.0e-26 122.5 163 66.3
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 3.0e-26 122.5 165 66.1
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 3.9e-26 122.1 173 65.3
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 3.9e-26 122.1 171 61.4
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.9e-25 119.8 149 62.4
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 4.3e-25 118.6 153 68.6
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 5.6e-25 118.2 149 63.8
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 2.8e-24 115.9 140 63.6
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 2.8e-24 115.9 172 62.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 6.2e-24 114.8 165 65.5
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.4e-23 113.6 125 76.0
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.4e-23 113.6 157 66.9
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 2.3e-23 112.8 143 64.3
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 5.2e-23 111.7 164 66.5
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 5.2e-23 111.7 172 61.6
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 6.8e-23 111.3 157 69.4
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 8.9e-23 110.9 149 65.8
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 8.9e-23 110.9 123 73.2
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 2.6e-22 109.4 157 66.9
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.6e-22 109.4 149 64.4
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.6e-22 109.4 156 66.0
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 3.4e-22 109.0 120 75.0
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 5.8e-22 108.2 172 61.0
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 1.3e-21 107.1 149 61.7
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.3e-21 107.1 140 62.9
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 1.7e-21 106.7 154 63.6
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 4.9e-21 105.1 172 59.3
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 4.9e-21 105.1 159 56.6
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 1.1e-20 104.0 118 68.6
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.4e-20 103.6 172 58.1
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.9e-20 103.2 171 57.3
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 2.4e-20 102.8 166 61.4
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.2e-20 102.4 166 60.8
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 3.2e-20 102.4 142 57.0
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 4.1e-20 102.1 147 63.9
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 5.4e-20 101.7 132 68.2
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 7.0e-20 101.3 167 60.5
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 7.0e-20 101.3 142 65.5
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 9.2e-20 100.9 152 65.1
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.2e-19 100.5 163 59.5
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.2e-19 100.5 167 58.1
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 1.6e-19 100.1 166 60.8
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 1.6e-19 100.1 166 60.8
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.6e-19 100.1 158 58.2
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 2.7e-19 99.4 174 60.9
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 3.5e-19 99.0 171 60.2
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 6.0e-19 98.2 174 60.3
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 6.0e-19 98.2 167 56.9
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 1.0e-18 97.4 164 56.7
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 1.0e-18 97.4 164 56.7
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.3e-18 97.1 129 69.0
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 1.7e-18 96.7 145 66.2
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 2.3e-18 96.3 165 57.6
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.3e-18 96.3 171 56.7
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.3e-18 96.3 142 65.5
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 5.0e-18 95.1 154 62.3
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 6.6e-18 94.7 154 63.6
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 8.6e-18 94.4 166 59.0
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 8.6e-18 94.4 129 69.8
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.1e-17 94.0 172 58.1
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 1.5e-17 93.6 137 68.6
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 1.5e-17 93.6 137 66.4
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.5e-17 93.6 155 58.1
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 2.5e-17 92.8 168 59.5
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.3e-17 92.4 173 57.2
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.3e-17 92.0 147 61.9
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 4.3e-17 92.0 157 61.8
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 7.3e-17 91.3 119 60.5
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 1.2e-16 90.5 126 64.3
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.6e-16 90.1 173 55.5
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 8.1e-16 87.8 166 58.4
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.4e-15 87.0 173 55.5
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 6.8e-15 84.7 123 66.7
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 6.8e-15 84.7 163 60.1
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 8.9e-15 84.3 121 48.8
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.0e-14 83.2 162 56.2
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 2.6e-14 82.8 175 54.3
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.6e-14 82.8 128 64.1
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.3e-13 80.5 162 54.9
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 4.9e-13 78.6 160 47.5
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.9e-12 76.6 162 54.9
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.4e-12 76.3 123 56.9
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.1e-12 75.5 169 53.8
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 5.4e-12 75.1 122 51.6
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 7.1e-12 74.7 168 53.6
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.2e-11 73.9 159 52.8
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.2e-11 73.9 104 70.2
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 3.9e-10 68.9 101 66.3
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-08 63.5 95 68.4
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 1.8e-07 60.1 134 50.7
Rhsim03G0179900 Rhododendron simsii HOM05D003145 ORTHO05D003586 5.2e-07 58.5 32 90.6
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 1.2e-06 57.4 120 55.0


User provided reference genes

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