Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 9.9e-25 116.3 74 100.0
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 9.0e-18 93.2 74 62.2
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 2.4e-15 85.1 65 70.8
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.0e-13 79.7 74 56.8
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 3.0e-13 78.2 75 65.3
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 6.7e-13 77.0 65 58.5
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 2.5e-12 75.1 75 56.0
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 7.4e-12 73.6 65 55.4
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 1.3e-11 72.8 69 53.6
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.3e-11 72.8 78 53.8
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 4.8e-11 70.9 69 60.9
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 6.2e-11 70.5 75 52.0
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 8.1e-11 70.1 75 50.7
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.1e-11 70.1 78 57.7
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.1e-11 70.1 74 52.7
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 8.1e-11 70.1 74 52.7
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.4e-10 69.3 67 52.2
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.4e-10 69.3 67 52.2
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.4e-10 69.3 65 52.3
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 1.8e-10 68.9 75 54.7
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 1.3e-08 62.8 66 50.0
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 1.7e-08 62.4 66 51.5
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.8e-08 61.2 78 46.2
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.8e-08 61.2 78 46.2
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 4.9e-08 60.8 43 62.8
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 6.5e-08 60.5 75 44.0
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 1.1e-07 59.7 64 51.6
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 1.4e-07 59.3 67 49.3
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.4e-07 59.3 65 47.7
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.4e-07 59.3 65 47.7
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 1.9e-07 58.9 68 50.0
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 1.9e-07 58.9 77 51.9
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 3.2e-07 58.2 74 47.3
CiPaw.06G016700 Carya illinoinensis HOM05D008114 ORTHO05D010089 3.2e-07 58.2 69 44.9
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 5.5e-07 57.4 54 55.6
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 5.5e-07 57.4 77 50.6
Thecc.02G221900 Theobroma cacao HOM05D008114 ORTHO05D010089 5.5e-07 57.4 76 47.4
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 7.1e-07 57.0 43 65.1
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 9.3e-07 56.6 65 49.2
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 1.2e-06 56.2 43 58.1
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 1.6e-06 55.8 70 51.4
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 4.6e-06 54.3 60 46.7
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 4.6e-06 54.3 64 48.4
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 7.9e-06 53.5 42 57.1


User provided reference genes

Program Settings