Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 8.4e-52 207.6 191 100.0
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 1.3e-20 104.0 121 56.2
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 3.2e-19 99.4 85 67.1
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 6.7e-17 91.7 68 69.1
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.7e-15 87.0 66 66.7
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 3.7e-15 85.9 63 71.4
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 8.2e-15 84.7 144 45.8
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 1.4e-14 84.0 83 56.6
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 2.0e-13 80.1 129 42.6
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 2.0e-13 80.1 127 46.5
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 3.5e-13 79.3 61 68.9
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 4.5e-13 79.0 66 65.2
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 5.9e-13 78.6 93 52.7
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 5.9e-13 78.6 71 62.0
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 1.0e-12 77.8 70 57.1
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 1.0e-12 77.8 96 50.0
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 1.0e-12 77.8 96 50.0
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 1.0e-12 77.8 66 63.6
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 1.3e-12 77.4 66 60.6
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 1.3e-12 77.4 65 63.1
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 1.7e-12 77.0 70 60.0
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 1.7e-12 77.0 115 49.6
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 1.7e-12 77.0 101 46.5
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 2.2e-12 76.6 60 70.0
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 2.9e-12 76.3 86 54.7
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 3.8e-12 75.9 92 50.0
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 3.8e-12 75.9 71 59.2
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 3.8e-12 75.9 59 64.4
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 5.0e-12 75.5 69 60.9
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 8.5e-12 74.7 123 48.0
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 8.5e-12 74.7 68 61.8
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 1.1e-11 74.3 62 61.3
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 1.1e-11 74.3 62 61.3
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 1.1e-11 74.3 62 61.3
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 1.1e-11 74.3 78 52.6
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 2.5e-11 73.2 100 47.0
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 2.5e-11 73.2 66 59.1
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 2.5e-11 73.2 72 54.2
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 3.2e-11 72.8 66 59.1
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 3.2e-11 72.8 95 46.3
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 3.2e-11 72.8 125 40.8
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 4.2e-11 72.4 71 53.5
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 4.2e-11 72.4 71 53.5
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 4.2e-11 72.4 92 52.2
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 5.5e-11 72.0 61 59.0
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 5.5e-11 72.0 71 56.3
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 5.5e-11 72.0 91 49.5
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 5.5e-11 72.0 66 59.1
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 7.2e-11 71.6 135 41.5
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 9.4e-11 71.2 88 48.9
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 9.4e-11 71.2 109 40.4
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 9.4e-11 71.2 123 45.5
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 9.4e-11 71.2 65 58.5
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 9.4e-11 71.2 96 45.8
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 1.2e-10 70.9 73 53.4
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 1.2e-10 70.9 94 46.8
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 1.2e-10 70.9 71 53.5
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 1.2e-10 70.9 73 54.8
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 1.6e-10 70.5 113 44.2
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.6e-10 70.5 65 58.5
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 2.1e-10 70.1 120 45.8
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 2.1e-10 70.1 92 50.0
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 2.7e-10 69.7 96 45.8
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 2.7e-10 69.7 62 56.5
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 3.6e-10 69.3 62 58.1
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 3.6e-10 69.3 66 56.1
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 4.7e-10 68.9 139 36.0
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 4.7e-10 68.9 68 54.4
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 4.7e-10 68.9 70 52.9
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 6.1e-10 68.6 68 51.5
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 6.1e-10 68.6 65 55.4
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 6.1e-10 68.6 117 41.0
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 8.0e-10 68.2 89 46.1
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 8.0e-10 68.2 113 45.1
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 1.0e-09 67.8 73 56.2
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 1.4e-09 67.4 78 51.3
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.4e-09 67.4 65 55.4
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 1.4e-09 67.4 66 54.5
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 1.8e-09 67.0 119 40.3
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 1.8e-09 67.0 65 56.9
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 2.3e-09 66.6 62 58.1
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 2.3e-09 66.6 61 55.7
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 3.0e-09 66.2 70 50.0
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 3.0e-09 66.2 116 38.8
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 4.0e-09 65.9 99 43.4
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 5.2e-09 65.5 74 44.6
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 5.2e-09 65.5 128 39.1
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 6.8e-09 65.1 66 50.0
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 6.8e-09 65.1 70 48.6
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 8.8e-09 64.7 66 56.1
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 8.8e-09 64.7 73 54.8
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 8.8e-09 64.7 56 62.5
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 1.5e-08 63.9 113 40.7
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 1.5e-08 63.9 113 38.9
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 1.5e-08 63.9 119 38.7
Peaxi162Scf00616g00064 Petunia axillaris HOM05D015294 ORTHO05D018867 2.0e-08 63.5 64 53.1
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 2.0e-08 63.5 112 40.2
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 2.0e-08 63.5 70 52.9
Haze_02139 Corylus avellana HOM05D023024 ORTHO05D008438 3.4e-08 62.8 66 54.5
Migut.E00657 Erythranthe guttata HOM05D007431 ORTHO05D008438 5.7e-08 62.0 98 45.9
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 7.5e-08 61.6 91 41.8
Migut.E00592 Erythranthe guttata HOM05D007431 ORTHO05D008438 9.8e-08 61.2 101 45.5
Nitab4.5_0004839g0050 Nicotiana tabacum HOM05D015294 ORTHO05D018867 1.3e-07 60.8 96 41.7
Sed0014169 Sechium edule HOM05D007431 ORTHO05D008438 2.8e-07 59.7 71 54.9
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 3.7e-07 59.3 110 40.0
MBI15_g23247_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 3.7e-07 59.3 120 35.8
SalBow2G1074 Salvia bowleyana HOM05D015294 ORTHO05D008438 3.7e-07 59.3 70 51.4
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 8.3e-07 58.2 93 39.8
MBI05_g12085_MAGBIO Magnolia biondii HOM05D053393 ORTHO05D008438 1.4e-06 57.4 55 54.5
MBI05_g28126_MAGBIO Magnolia biondii HOM05D053393 ORTHO05D008438 1.4e-06 57.4 55 54.5
Psat2g042560 Pisum sativum HOM05D007431 ORTHO05D008438 2.4e-06 56.6 50 64.0
ECA232G0929 Erigeron canadensis HOM05D007431 ORTHO05D008438 7.0e-06 55.1 117 39.3


User provided reference genes

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