Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.1e-74 283.1 134 100.0
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.7e-59 232.6 116 90.5
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.2e-59 232.3 116 90.5
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 2.6e-55 218.8 116 85.3
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 3.4e-55 218.4 117 84.6
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 5.7e-55 217.6 116 84.5
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 7.5e-55 217.2 116 81.9
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 7.5e-55 217.2 127 81.9
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 7.5e-55 217.2 116 84.5
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.3e-54 216.5 140 75.0
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.7e-54 216.1 140 75.7
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 1.7e-54 216.1 116 83.6
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 2.2e-54 215.7 140 73.6
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 2.8e-54 215.3 116 82.8
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 2.8e-54 215.3 140 74.3
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.7e-54 214.9 116 81.9
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 3.7e-54 214.9 116 81.9
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 3.7e-54 214.9 116 82.8
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 4.8e-54 214.5 140 75.7
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 6.3e-54 214.2 116 82.8
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 6.3e-54 214.2 116 82.8
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 6.3e-54 214.2 116 82.8
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 6.3e-54 214.2 119 84.0
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.1e-53 213.4 116 79.3
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.4e-53 213.0 140 73.6
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 1.4e-53 213.0 116 82.8
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 1.8e-53 212.6 116 82.8
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 3.1e-53 211.8 116 81.9
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 3.1e-53 211.8 116 80.2
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 4.1e-53 211.5 116 81.9
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 4.1e-53 211.5 140 73.6
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 4.1e-53 211.5 116 81.0
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 5.4e-53 211.1 116 81.0
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 5.4e-53 211.1 114 84.2
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 7.0e-53 210.7 116 80.2
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.6e-52 209.5 116 79.3
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.6e-52 209.5 114 81.6
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 1.6e-52 209.5 116 79.3
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 1.6e-52 209.5 140 72.1
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 2.0e-52 209.1 114 81.6
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.7e-52 208.8 116 80.2
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.7e-52 208.8 116 80.2
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 2.7e-52 208.8 140 72.1
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 2.7e-52 208.8 116 80.2
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 3.5e-52 208.4 116 81.0
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 3.5e-52 208.4 116 80.2
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 4.5e-52 208.0 116 79.3
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 5.9e-52 207.6 116 79.3
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 7.7e-52 207.2 140 71.4
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.0e-51 206.8 117 80.3
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 1.0e-51 206.8 117 80.3
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.0e-51 206.8 119 79.0
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.3e-51 206.5 140 71.4
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.7e-51 206.1 116 79.3
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 2.2e-51 205.7 114 82.5
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 3.8e-51 204.9 116 80.2
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 8.5e-51 203.8 116 80.2
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 8.5e-51 203.8 119 79.8
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 8.5e-51 203.8 116 75.9
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 8.5e-51 203.8 124 76.6
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.1e-50 203.4 116 76.7
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 1.5e-50 203.0 119 79.0
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.5e-50 203.0 119 79.0
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.5e-50 203.0 119 79.0
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 1.9e-50 202.6 116 79.3
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.9e-50 202.6 122 77.9
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 3.2e-50 201.8 119 78.2
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 3.2e-50 201.8 119 78.2
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 3.2e-50 201.8 119 78.2
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 3.2e-50 201.8 119 78.2
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 3.2e-50 201.8 119 78.2
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 3.2e-50 201.8 119 78.2
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 3.2e-50 201.8 116 77.6
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 3.2e-50 201.8 116 77.6
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 3.2e-50 201.8 120 80.0
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 3.2e-50 201.8 116 75.9
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 5.5e-50 201.1 116 74.1
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 7.2e-50 200.7 140 68.6
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 7.2e-50 200.7 119 77.3
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 7.2e-50 200.7 117 78.6
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.2e-49 199.9 119 77.3
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.2e-49 199.9 113 78.8
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 1.6e-49 199.5 116 78.4
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 2.1e-49 199.1 116 75.9
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.1e-49 199.1 116 75.9
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.1e-49 199.1 116 75.9
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 2.1e-49 199.1 117 75.2
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.1e-49 199.1 116 77.6
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 1.0e-48 196.8 117 74.4
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.4e-48 196.4 119 76.5
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 1.4e-48 196.4 116 75.0
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.4e-48 196.4 116 73.3
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 2.3e-48 195.7 116 75.0
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.5e-47 193.0 119 75.6
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.5e-47 193.0 119 75.6
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.5e-47 193.0 119 75.6
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.6e-47 192.2 161 59.0
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 4.4e-47 191.4 141 68.1
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 7.5e-47 190.7 141 67.4
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 7.5e-47 190.7 141 67.4
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 9.8e-47 190.3 116 73.3
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 2.2e-46 189.1 122 73.8
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.8e-46 188.7 119 72.3
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 4.1e-45 184.9 117 73.5
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 4.2e-42 174.9 91 85.7
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 3.0e-40 168.7 140 60.0
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 9.8e-39 163.7 117 63.2
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 8.3e-38 160.6 139 60.4
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 8.3e-38 160.6 139 60.4
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 7.0e-37 157.5 112 65.2
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 8.6e-35 150.6 101 70.3
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 2.3e-32 142.5 90 72.2
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.2e-31 140.2 116 60.3
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 4.9e-30 134.8 95 72.6
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.3e-27 126.7 119 56.3
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 2.1e-25 119.4 64 84.4
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 2.8e-25 119.0 123 49.6
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 8.1e-25 117.5 88 67.0
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 1.1e-24 117.1 118 49.2
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 2.3e-24 115.9 133 48.1
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.7e-22 108.6 90 62.2
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.1e-21 107.1 70 65.7
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.4e-21 106.7 64 73.4
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.9e-21 106.3 67 73.1
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.0e-19 100.5 53 83.0
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.3e-19 100.1 53 83.0
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 7.3e-18 94.4 71 56.3
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.9e-13 79.7 42 81.0
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 2.4e-13 79.3 42 81.0


User provided reference genes

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