Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032110 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 2.8e-85 318.5 159 100.0
CSS0017759 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 1.9e-81 305.8 167 93.4
CSS0034063 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 1.8e-63 246.1 158 82.3
SalBow8G2376 Salvia bowleyana HOM05D004819 ORTHO05D005654 2.6e-54 215.7 158 69.6
Oeu046577.1 Olea europaea HOM05D004819 ORTHO05D005654 9.8e-54 213.8 158 69.0
Oeu052162.4 Olea europaea HOM05D004819 ORTHO05D005654 1.3e-53 213.4 158 69.6
Dinv15153 Davidia involucrata HOM05D004819 ORTHO05D005654 3.7e-53 211.8 158 71.5
TAR365G0460 Trochodendron aralioides HOM05D004819 ORTHO05D005654 8.3e-53 210.7 158 70.9
Actinidia40384 Actinidia chinensis HOM05D004819 ORTHO05D005654 1.8e-52 209.5 160 71.2
Rhsim04G0240100 Rhododendron simsii HOM05D004819 ORTHO05D005654 2.4e-52 209.1 158 71.5
DCAR_030463 Daucus carota HOM05D004819 ORTHO05D005654 3.2e-52 208.8 158 69.6
GSVIVG01034978001 Vitis vinifera HOM05D004819 ORTHO05D005654 1.6e-51 206.5 158 67.7
Haze_01312 Corylus avellana HOM05D004819 ORTHO05D005654 2.0e-51 206.1 158 69.0
Migut.G00071 Erythranthe guttata HOM05D004819 ORTHO05D005654 2.0e-51 206.1 158 66.5
Cfa015302 Carpinus fangiana HOM05D004819 ORTHO05D005654 3.5e-51 205.3 158 68.4
Nitab4.5_0000931g0050 Nicotiana tabacum HOM05D004819 ORTHO05D005654 4.6e-51 204.9 158 67.7
vmacro08030 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 4.6e-51 204.9 158 69.6
SGA_v2.0_scaffold104G30069 Striga asiatica HOM05D004819 ORTHO05D005654 7.8e-51 204.1 160 66.2
Atru.chr4.3039 Acer truncatum HOM05D004819 ORTHO05D005654 1.0e-50 203.8 158 67.1
MD16G1152500 Malus domestica HOM05D004819 ORTHO05D005654 1.3e-50 203.4 158 68.4
Peaxi162Scf00228g00333 Petunia axillaris HOM05D004819 ORTHO05D005654 1.3e-50 203.4 158 67.1
MSTRG.10156 Avicennia marina HOM05D004819 ORTHO05D005654 1.7e-50 203.0 158 64.6
Cc03_g00710 Coffea canephora HOM05D004819 ORTHO05D005654 1.7e-50 203.0 158 67.1
Ciclev10004336m.g Citrus clementina HOM05D004819 ORTHO05D005654 2.3e-50 202.6 158 67.1
CiPaw.01G137100 Carya illinoinensis HOM05D004819 ORTHO05D005654 3.9e-50 201.8 158 67.7
Nn2g14951 Nelumbo nucifera HOM05D004819 ORTHO05D005654 1.1e-49 200.3 158 66.5
Nn4g25546 Nelumbo nucifera HOM05D004819 ORTHO05D005654 1.5e-49 199.9 158 65.8
Prupe.1G115700 Prunus persica HOM05D004819 ORTHO05D005654 1.5e-49 199.9 158 66.5
CANSAT78G1713 Cannabis sativa HOM05D004819 ORTHO05D005654 1.9e-49 199.5 158 66.5
Sopen01g024570 Solanum pennellii HOM05D004819 ORTHO05D005654 1.9e-49 199.5 158 65.8
Manes.03G205800 Manihot esculenta HOM05D004819 ORTHO05D005654 2.5e-49 199.1 160 65.0
QL06p012610 Quercus lobata HOM05D004819 ORTHO05D005654 2.5e-49 199.1 158 67.1
TWI09G1587 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 2.5e-49 199.1 158 65.8
PGR004G0637 Punica granatum HOM05D004819 ORTHO05D005654 4.3e-49 198.4 158 66.5
PGSC0003DMG400001205 Solanum tuberosum HOM05D004819 ORTHO05D005654 4.3e-49 198.4 158 65.8
Sc09g0007260 Simmondsia chinensis HOM05D004819 ORTHO05D005654 7.3e-49 197.6 158 63.3
TPR.G25430 Trifolium pratense HOM05D004819 ORTHO05D005654 7.3e-49 197.6 158 64.6
Solyc01g058730.4 Solanum lycopersicum HOM05D004819 ORTHO05D005654 1.2e-48 196.8 158 67.1
Aa31LG10G5910 Aethionema arabicum HOM05D004819 ORTHO05D005654 2.1e-48 196.1 158 66.5
Eucgr.H04055 Eucalyptus grandis HOM05D004819 ORTHO05D005654 2.1e-48 196.1 158 65.8
Gohir.D10G179600 Gossypium hirsutum HOM05D004819 ORTHO05D005654 2.1e-48 196.1 158 65.8
Thecc.04G302500 Theobroma cacao HOM05D004819 ORTHO05D005654 2.1e-48 196.1 158 66.5
Aqoxy2G02702 Aquilegia oxysepala HOM05D004819 ORTHO05D005654 2.8e-48 195.7 158 65.8
Ca_21436_v3 Cicer arietinum L. HOM05D004819 ORTHO05D005654 3.6e-48 195.3 158 64.6
FvH4_4g19930 Fragaria vesca HOM05D004819 ORTHO05D005654 3.6e-48 195.3 158 65.8
Gohir.A10G173100 Gossypium hirsutum HOM05D004819 ORTHO05D005654 3.6e-48 195.3 158 65.2
PSO761G0636 Papaver somniferum HOM05D004819 ORTHO05D005654 3.6e-48 195.3 158 66.5
Gorai.011G200900 Gossypium raimondii HOM05D004819 ORTHO05D005654 4.7e-48 194.9 158 65.8
Lj3C833T2 Lonicera japonica HOM05D004819 ORTHO05D005654 4.7e-48 194.9 159 66.0
THA.LOC104802608 Tarenaya hassleriana HOM05D004819 ORTHO05D005654 4.7e-48 194.9 158 64.6
BcaNung00215 Brassica carinata HOM05D004819 ORTHO05D005654 6.2e-48 194.5 158 64.6
TWI53G0610 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 6.2e-48 194.5 158 65.2
BcaC09g50317 Brassica carinata HOM05D004819 ORTHO05D005654 8.0e-48 194.1 158 64.6
C01p26720 Brassica napus HOM05D004819 ORTHO05D005654 8.0e-48 194.1 158 64.6
FAN07G2526 Fragaria x ananassa HOM05D004819 ORTHO05D005654 8.0e-48 194.1 158 65.2
FAN12G0990 Fragaria x ananassa HOM05D004819 ORTHO05D005654 8.0e-48 194.1 158 65.2
PSO210G2958 Papaver somniferum HOM05D004819 ORTHO05D005654 1.4e-47 193.4 158 65.8
A03p49650 Brassica napus HOM05D004819 ORTHO05D005654 1.8e-47 193.0 158 64.6
BraA03t14064Z Brassica rapa HOM05D004819 ORTHO05D005654 1.8e-47 193.0 158 64.6
BcaC06g33458 Brassica carinata HOM05D004819 ORTHO05D005654 2.3e-47 192.6 158 63.9
A01p21370 Brassica napus HOM05D004819 ORTHO05D005654 2.3e-47 192.6 158 63.9
BolC1t02613H Brassica oleracea HOM05D004819 ORTHO05D005654 2.3e-47 192.6 158 63.9
BolC7t45297H Brassica oleracea HOM05D004819 ORTHO05D005654 2.3e-47 192.6 158 63.9
BraA01t02042Z Brassica rapa HOM05D004819 ORTHO05D005654 2.3e-47 192.6 158 63.9
ClCG05G006610 Citrullus lanatus HOM05D004819 ORTHO05D005654 3.1e-47 192.2 158 64.6
MELO3C006720.2 Cucumis melo HOM05D004819 ORTHO05D005654 3.1e-47 192.2 158 63.9
RcHm_v2.0_Chr4g0425571 Rosa chinensis HOM05D004819 ORTHO05D005654 3.1e-47 192.2 158 64.6
Sp7g14690 Schrenkiella parvula HOM05D004819 ORTHO05D005654 3.1e-47 192.2 158 63.3
C07p47720 Brassica napus HOM05D004819 ORTHO05D005654 4.0e-47 191.8 158 63.3
BcaC06g32994 Brassica carinata HOM05D004819 ORTHO05D005654 5.2e-47 191.4 158 63.3
CsaV3_3G015230 Cucumis sativus L. HOM05D004819 ORTHO05D005654 5.2e-47 191.4 158 63.9
Duzib212G0926 Durio zibethinus HOM05D004819 ORTHO05D005654 5.2e-47 191.4 158 65.2
AT4G16180 Arabidopsis thaliana HOM05D004819 ORTHO05D005654 6.8e-47 191.0 158 63.3
Glyma.07G238900 Glycine max HOM05D004819 ORTHO05D005654 6.8e-47 191.0 158 64.6
Carub.0007s2536 Capsella rubella HOM05D004819 ORTHO05D005654 1.2e-46 190.3 158 62.7
AL7G38910 Arabidopsis lyrata HOM05D004819 ORTHO05D005654 2.0e-46 189.5 158 63.3
Lj4g0007943 Lotus japonicus HOM05D004819 ORTHO05D005654 2.0e-46 189.5 158 62.7
Thhalv10024420m.g Eutrema salsugineum HOM05D004819 ORTHO05D005654 2.6e-46 189.1 158 62.7
Sed0007022 Sechium edule HOM05D004819 ORTHO05D005654 2.6e-46 189.1 158 63.3
CARHR222550 Cardamine hirsuta HOM05D004819 ORTHO05D005654 4.4e-46 188.3 158 61.4
Phvul.003G115600 Phaseolus vulgaris HOM05D004819 ORTHO05D005654 4.4e-46 188.3 158 63.3
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea HOM05D004819 ORTHO05D005654 5.8e-46 188.0 158 62.7
Lalb_Chr07g0182051 Lupinus albus HOM05D004819 ORTHO05D005654 5.8e-46 188.0 158 61.4
VMungo1215G1911 Vigna mungo HOM05D004819 ORTHO05D005654 9.8e-46 187.2 158 63.3
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea HOM05D004819 ORTHO05D005654 1.3e-45 186.8 158 62.0
Glyma.17G034800 Glycine max HOM05D004819 ORTHO05D005654 1.3e-45 186.8 158 63.3
Sed0001798 Sechium edule HOM05D004819 ORTHO05D005654 1.3e-45 186.8 158 63.3
ATR0693G033 Amborella trichopoda HOM05D004819 ORTHO05D005654 1.7e-45 186.4 158 63.9
CDE02G0522 Ceratophyllum demersum HOM05D004819 ORTHO05D005654 6.4e-45 184.5 160 61.2
AUR62016223 Chenopodium quinoa HOM05D004819 ORTHO05D005654 4.1e-44 181.8 158 59.5
ECA233G5711 Erigeron canadensis HOM05D004819 ORTHO05D005654 4.1e-44 181.8 159 61.0
HanXRQChr02g0048601 Helianthus annuus HOM05D004819 ORTHO05D005654 5.4e-44 181.4 158 60.8
Psat4g022840 Pisum sativum HOM05D004819 ORTHO05D005654 5.4e-44 181.4 158 59.5
Potri.010G146800 Populus trichocarpa HOM05D004819 ORTHO05D005654 5.4e-44 181.4 158 60.1
Cpa.g.sc9.47 Carica papaya HOM05D004819 ORTHO05D005654 7.0e-44 181.0 159 62.3
Ah.05g176730 Amaranthus hybridus HOM05D004819 ORTHO05D005654 9.2e-44 180.6 158 58.9
AUR62039265 Chenopodium quinoa HOM05D004819 ORTHO05D005654 9.2e-44 180.6 158 58.9
Manes.15G000800 Manihot esculenta HOM05D004819 ORTHO05D005654 2.0e-43 179.5 161 60.9
Lsat_1_v5_gn_6_1101 Lactuca sativa HOM05D004819 ORTHO05D005654 6.0e-43 177.9 158 58.9
Hund03132 Selenicereus undatus HOM05D004819 ORTHO05D005654 1.3e-42 176.8 159 59.7
Sabra10G0113000 Salix brachista HOM05D004819 ORTHO05D005654 1.7e-42 176.4 158 58.2
HanXRQChr11g0353871 Helianthus annuus HOM05D004819 ORTHO05D005654 8.6e-42 174.1 158 58.9
EL10Ac3g05522 Beta vulgaris HOM05D004819 ORTHO05D005654 1.1e-41 173.7 158 57.0
Zm00001eb014900 Zea mays HOM05D004819 ORTHO05D005654 1.2e-40 170.2 160 57.5
SHI00126 Sapria himalayana HOM05D004819 ORTHO05D005654 6.8e-39 164.5 157 56.1
Lsat_1_v5_gn_1_41600 Lactuca sativa HOM05D004819 ORTHO05D005654 2.6e-38 162.5 158 56.3
COL.COLO4_34600 Corchorus olitorius HOM05D004819 ORTHO05D005654 7.5e-38 161.0 158 56.3
Eucgr.H04185 Eucalyptus grandis HOM05D004819 ORTHO05D005654 4.9e-37 158.3 158 56.3
Nitab4.5_0000177g0090 Nicotiana tabacum HOM05D004819 ORTHO05D005654 3.3e-33 145.6 158 50.6
Mapoly0066s0100 Marchantia polymorpha HOM05D004819 ORTHO05D005654 6.8e-31 137.9 163 47.9
EL10Ac4g08939 Beta vulgaris HOM05D004819 ORTHO05D005654 5.8e-30 134.8 89 70.8
Rhsim05G0134500 Rhododendron simsii HOM05D004819 ORTHO05D005654 1.4e-28 130.2 77 83.1
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis HOM05D004819 ORTHO05D005654 3.3e-25 119.0 159 44.0
Pp3c16_6520 Physcomitrium patens HOM05D004819 ORTHO05D005654 4.7e-24 115.2 167 40.1
SMO298G0056 Selaginella moellendorffii HOM05D004819 ORTHO05D005654 2.4e-23 112.8 168 41.7
Pp3c5_14560 Physcomitrium patens HOM05D004819 ORTHO05D005654 8.9e-23 110.9 89 56.2
Nn2g14956 Nelumbo nucifera HOM05D004819 ORTHO05D005654 2.3e-18 96.3 97 55.7
SEGI_30135 Sequoiadendron giganteum HOM05D004819 ORTHO05D005654 8.1e-16 87.8 99 52.5
CBR_g61507 Chara braunii HOM05D004819 ORTHO05D005654 1.8e-15 86.7 89 47.2
Sabra15G0067600 Salix brachista HOM05D004819 ORTHO05D005654 5.3e-15 85.1 102 49.0
unitig_88.g27704 Utricularia gibba HOM05D002812 ORTHO05D005654 5.3e-15 85.1 99 50.5
HPP92_005424 Vanilla planifolia HOM05D004819 ORTHO05D005654 2.2e-13 79.7 89 51.7
MCO15G339 Micromonas commoda HOM05D004819 ORTHO05D005654 1.2e-11 73.9 95 38.9
PGSC0003DMG402014601 Solanum tuberosum HOM05D004819 ORTHO05D005654 2.1e-08 63.2 47 59.6


User provided reference genes

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