Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032096 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007902 5.6e-52 207.2 97 100.0
CSS0002465 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007902 5.8e-33 144.1 85 83.5
Rhsim02G0173700 Rhododendron simsii HOM05D000972 ORTHO05D007902 7.4e-28 127.1 85 72.9
Actinidia03520 Actinidia chinensis HOM05D000972 ORTHO05D007902 9.6e-28 126.7 90 71.1
Solyc06g064640.3 Solanum lycopersicum HOM05D000972 ORTHO05D007902 1.6e-27 125.9 85 72.9
vmacro11036 Vaccinium macrocarpon HOM05D000972 ORTHO05D007902 1.6e-27 125.9 82 75.6
DCAR_014005 Daucus carota HOM05D000972 ORTHO05D007902 3.7e-27 124.8 82 75.6
SalBow7G1915 Salvia bowleyana HOM05D000972 ORTHO05D007902 3.7e-27 124.8 85 71.8
Sopen06g023120 Solanum pennellii HOM05D000972 ORTHO05D007902 4.8e-27 124.4 85 71.8
Hma1.2p1_0442F.1_g153990 Hydrangea macrophylla HOM05D000972 ORTHO05D007902 6.2e-27 124.0 82 73.2
Lj9A699G51 Lonicera japonica HOM05D000972 ORTHO05D007902 6.2e-27 124.0 84 75.0
Actinidia29393 Actinidia chinensis HOM05D000972 ORTHO05D007902 8.1e-27 123.6 85 70.6
Migut.C01362 Erythranthe guttata HOM05D000972 ORTHO05D007902 1.1e-26 123.2 81 75.3
CAN.G1199.5 Capsicum annuum HOM05D000972 ORTHO05D007902 1.4e-26 122.9 85 71.8
Nitab4.5_0002654g0090 Nicotiana tabacum HOM05D000972 ORTHO05D007902 1.4e-26 122.9 85 71.8
Nitab4.5_0003510g0110 Nicotiana tabacum HOM05D000972 ORTHO05D007902 1.4e-26 122.9 85 71.8
COL.COLO4_24587 Corchorus olitorius HOM05D000972 ORTHO05D007902 3.1e-26 121.7 85 67.1
Peaxi162Scf00961g00038 Petunia axillaris HOM05D000972 ORTHO05D007902 3.1e-26 121.7 82 74.4
CiPaw.03G016500 Carya illinoinensis HOM05D000972 ORTHO05D007902 4.0e-26 121.3 85 68.2
THA.LOC104815868 Tarenaya hassleriana HOM05D000972 ORTHO05D007902 5.3e-26 120.9 81 72.8
Cfa008100 Carpinus fangiana HOM05D000972 ORTHO05D007902 6.9e-26 120.6 85 67.1
Cc10_g09070 Coffea canephora HOM05D000972 ORTHO05D007902 6.9e-26 120.6 82 73.2
Haze_13936 Corylus avellana HOM05D000972 ORTHO05D007902 6.9e-26 120.6 85 67.1
Dinv09399 Davidia involucrata HOM05D000972 ORTHO05D007902 9.0e-26 120.2 85 68.2
Oeu013903.1 Olea europaea HOM05D000972 ORTHO05D007902 1.5e-25 119.4 85 69.4
MSTRG.25494 Avicennia marina HOM05D000972 ORTHO05D007902 2.0e-25 119.0 85 69.4
A02p26770 Brassica napus HOM05D000972 ORTHO05D007902 2.0e-25 119.0 81 71.6
BraA02t07681Z Brassica rapa HOM05D000972 ORTHO05D007902 2.0e-25 119.0 81 71.6
Thhalv10028731m.g Eutrema salsugineum HOM05D000972 ORTHO05D007902 2.0e-25 119.0 81 71.6
PSO170G0001 Papaver somniferum HOM05D000972 ORTHO05D007902 2.0e-25 119.0 85 65.9
Sp6g07390 Schrenkiella parvula HOM05D000972 ORTHO05D007902 2.0e-25 119.0 81 71.6
Lalb_Chr05g0211421 Lupinus albus HOM05D000972 ORTHO05D007902 2.6e-25 118.6 83 68.7
BcaB01g02768 Brassica carinata HOM05D000972 ORTHO05D007902 3.4e-25 118.2 81 71.6
Atru.chr13.2464 Acer truncatum HOM05D000972 ORTHO05D007902 4.5e-25 117.9 82 69.5
CARHR261030 Cardamine hirsuta HOM05D000972 ORTHO05D007902 4.5e-25 117.9 81 70.4
Thecc.08G174600 Theobroma cacao HOM05D000972 ORTHO05D007902 4.5e-25 117.9 85 65.9
Aa31LG9G11960 Aethionema arabicum HOM05D000972 ORTHO05D007902 5.8e-25 117.5 81 71.6
LjContig00222g0015412 Lotus japonicus HOM05D000972 ORTHO05D007902 5.8e-25 117.5 83 66.3
QL09p003678 Quercus lobata HOM05D000972 ORTHO05D007902 5.8e-25 117.5 85 64.7
Zm00001eb145490 Zea mays HOM05D000972 ORTHO05D007902 5.8e-25 117.5 83 67.5
RcHm_v2.0_Chr7g0231591 Rosa chinensis HOM05D000972 ORTHO05D007902 7.6e-25 117.1 83 68.7
VMungo1309G3099 Vigna mungo HOM05D000972 ORTHO05D007902 7.6e-25 117.1 79 72.2
AL6G43750 Arabidopsis lyrata HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
AT4G10030 Arabidopsis thaliana HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
arahy.Tifrunner.gnm1.ann1.ARI0Y2 Arachis hypogaea HOM05D000972 ORTHO05D007902 9.9e-25 116.7 83 67.5
arahy.Tifrunner.gnm1.ann1.T9SADQ Arachis hypogaea HOM05D000972 ORTHO05D007902 9.9e-25 116.7 83 67.5
BcaC01g04694 Brassica carinata HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
BcaC03g16432 Brassica carinata HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
A03p28830 Brassica napus HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
C02p42570 Brassica napus HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
C03p34850 Brassica napus HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
BolC3t15797H Brassica oleracea HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
BraA03t12081Z Brassica rapa HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
CANSAT25G3161 Cannabis sativa HOM05D000972 ORTHO05D007902 9.9e-25 116.7 83 66.3
Carub.0006s2858 Capsella rubella HOM05D000972 ORTHO05D007902 9.9e-25 116.7 81 70.4
Psat2g186760 Pisum sativum HOM05D000972 ORTHO05D007902 9.9e-25 116.7 83 67.5
Cpa.g.sc21.65 Carica papaya HOM05D000972 ORTHO05D007902 1.3e-24 116.3 85 63.5
Duzib177G0312 Durio zibethinus HOM05D000972 ORTHO05D007902 1.3e-24 116.3 85 64.7
ECA232G4303 Erigeron canadensis HOM05D000972 ORTHO05D007902 1.3e-24 116.3 82 68.3
FvH4_5g33210 Fragaria vesca HOM05D000972 ORTHO05D007902 1.3e-24 116.3 83 67.5
FAN18G3413 Fragaria x ananassa HOM05D000972 ORTHO05D007902 1.3e-24 116.3 83 67.5
Glyma.01G231600 Glycine max HOM05D000972 ORTHO05D007902 1.3e-24 116.3 79 70.9
Glyma.11G014500 Glycine max HOM05D000972 ORTHO05D007902 1.7e-24 115.9 80 70.0
PSO017G6211 Papaver somniferum HOM05D000972 ORTHO05D007902 1.7e-24 115.9 85 63.5
Eucgr.F02972 Eucalyptus grandis HOM05D000972 ORTHO05D007902 2.2e-24 115.5 85 65.9
Phvul.002G035500 Phaseolus vulgaris HOM05D000972 ORTHO05D007902 2.2e-24 115.5 79 70.9
HanXRQChr11g0326371 Helianthus annuus HOM05D000972 ORTHO05D007902 2.9e-24 115.2 82 68.3
Manes.02G207800 Manihot esculenta HOM05D000972 ORTHO05D007902 2.9e-24 115.2 85 63.5
SEGI_17242 Sequoiadendron giganteum HOM05D000972 ORTHO05D007902 2.9e-24 115.2 82 69.5
TWI18G0505 Tripterygium wilfordii HOM05D000972 ORTHO05D007902 2.9e-24 115.2 85 64.7
TAR381G0923 Trochodendron aralioides HOM05D000972 ORTHO05D007902 2.9e-24 115.2 85 64.7
PGR042G1357 Punica granatum HOM05D000972 ORTHO05D007902 3.8e-24 114.8 85 67.1
Sc10g0009040 Simmondsia chinensis HOM05D000972 ORTHO05D007902 4.9e-24 114.4 85 64.7
ATR1089G075 Amborella trichopoda HOM05D000972 ORTHO05D007902 6.4e-24 114.0 85 64.7
MBI06_g15296_MAGBIO Magnolia biondii HOM05D000972 ORTHO05D007902 6.4e-24 114.0 85 62.4
Prupe.1G546000 Prunus persica HOM05D000972 ORTHO05D007902 6.4e-24 114.0 80 71.2
Gohir.D13G120200 Gossypium hirsutum HOM05D000972 ORTHO05D007902 8.4e-24 113.6 85 63.5
Gorai.013G134500 Gossypium raimondii HOM05D000972 ORTHO05D007902 8.4e-24 113.6 85 63.5
Os01g0885600 Oryza sativa ssp. japonica HOM05D000972 ORTHO05D007902 8.4e-24 113.6 83 66.3
Pp3c9_110 Physcomitrium patens HOM05D000972 ORTHO05D007902 8.4e-24 113.6 80 66.2
HPP92_012703 Vanilla planifolia HOM05D000972 ORTHO05D007902 8.4e-24 113.6 85 62.4
HPP92_012684 Vanilla planifolia HOM05D000972 ORTHO05D007902 1.1e-23 113.2 85 61.2
Ca_24478_v3 Cicer arietinum L. HOM05D000972 ORTHO05D007902 1.4e-23 112.8 80 67.5
MD15G1397200 Malus domestica HOM05D000972 ORTHO05D007902 1.4e-23 112.8 83 67.5
Potri.019G074600 Populus trichocarpa HOM05D000972 ORTHO05D007902 1.4e-23 112.8 82 65.9
Mapoly0057s0050 Marchantia polymorpha HOM05D000972 ORTHO05D007902 1.9e-23 112.5 80 66.2
CDE07G1949 Ceratophyllum demersum HOM05D000972 ORTHO05D007902 2.4e-23 112.1 82 64.6
Ciclev10020574m.g Citrus clementina HOM05D000972 ORTHO05D007902 2.4e-23 112.1 82 65.9
Gohir.A13G116900 Gossypium hirsutum HOM05D000972 ORTHO05D007902 2.4e-23 112.1 85 62.4
GSVIVG01036396001 Vitis vinifera HOM05D000972 ORTHO05D007902 2.4e-23 112.1 82 65.9
Aqoxy5G00848 Aquilegia oxysepala HOM05D000972 ORTHO05D007902 5.5e-23 110.9 85 62.4
AagrBONN_evm.TU.Sc2ySwM_228.2032 Anthoceros agrestis HOM05D000972 ORTHO05D007902 7.1e-23 110.5 80 66.2
AUR62022408 Chenopodium quinoa HOM05D000972 ORTHO05D007902 3.5e-22 108.2 82 62.2
Lsat_1_v5_gn_4_133140 Lactuca sativa HOM05D000972 ORTHO05D007902 3.5e-22 108.2 82 63.4
Hund02269 Selenicereus undatus HOM05D000972 ORTHO05D007902 4.6e-22 107.8 82 62.2
CsaV3_2G033140 Cucumis sativus L. HOM05D000972 ORTHO05D007902 7.9e-22 107.1 83 62.7
AUR62042166 Chenopodium quinoa HOM05D000972 ORTHO05D007902 1.8e-21 105.9 82 61.0
MELO3C008085.2 Cucumis melo HOM05D000972 ORTHO05D007902 1.8e-21 105.9 80 65.0
ClCG11G008910 Citrullus lanatus HOM05D000972 ORTHO05D007902 3.0e-21 105.1 82 62.2
SMO351G0469 Selaginella moellendorffii HOM05D000972 ORTHO05D007902 3.9e-21 104.8 82 61.0
CBR_g4880 Chara braunii HOM05D000972 ORTHO05D007902 1.5e-20 102.8 81 59.3
unitig_37.g13083 Utricularia gibba HOM05D000972 ORTHO05D007902 7.4e-20 100.5 75 66.7
EL10Ac1g01707 Beta vulgaris HOM05D000972 ORTHO05D007902 1.6e-19 99.4 93 54.8
FvH4_5g32660 Fragaria vesca HOM05D000972 ORTHO05D007902 1.6e-19 99.4 72 66.7
Dinv01246 Davidia involucrata HOM05D000972 ORTHO05D007902 6.5e-16 87.4 71 62.0
Cre08.g384600 Chlamydomonas reinhardtii HOM05D000972 ORTHO05D007902 5.5e-15 84.3 81 55.6
Sabra19G0085300 Salix brachista HOM05D000972 ORTHO05D007902 3.0e-13 78.6 64 64.1
Cre08.g384800 Chlamydomonas reinhardtii HOM05D000972 ORTHO05D007902 1.6e-11 72.8 87 49.4
Sabra15G0089800 Salix brachista HOM05D000972 ORTHO05D007902 6.3e-11 70.9 60 61.7
MCO10G240 Micromonas commoda HOM05D000972 ORTHO05D007902 3.1e-10 68.6 86 40.7
FAN18G0128 Fragaria x ananassa HOM05D000972 ORTHO05D007902 4.1e-10 68.2 55 61.8
MD08G1214300 Malus domestica HOM05D000972 ORTHO05D007902 6.9e-10 67.4 35 88.6
TPR.G40666 Trifolium pratense HOM05D000972 ORTHO05D007902 1.5e-09 66.2 36 75.0
Dinv31785 Davidia involucrata HOM05D000697 ORTHO05D000169 2.0e-09 65.9 63 57.1
TPR.G37881 Trifolium pratense HOM05D000972 ORTHO05D007902 1.7e-08 62.8 36 77.8
Sed0026479 Sechium edule HOM05D000972 ORTHO05D007902 3.8e-08 61.6 39 69.2
FAN13G0779 Fragaria x ananassa HOM05D000972 ORTHO05D007902 5.0e-08 61.2 35 77.1
MD08G1213900 Malus domestica HOM05D000972 ORTHO05D007902 5.0e-08 61.2 55 58.2
Dinv12388 Davidia involucrata HOM05D000972 ORTHO05D007902 6.5e-08 60.8 62 51.6
PRCOL_00003039 Prasinoderma coloniale HOM05D000972 ORTHO05D007902 1.4e-07 59.7 81 40.7
Lsat_1_v5_gn_3_130281 Lactuca sativa HOM05D001939 ORTHO05D000541 2.1e-06 55.8 34 73.5


User provided reference genes

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