Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032089 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.8e-123 444.9 229 100.0
CSS0044430 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 3.9e-80 302.0 256 66.0
CSS0043105 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-79 300.4 277 63.5
CSS0031147 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 1.7e-54 216.9 247 56.3
CSS0040916 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 2.8e-54 216.1 247 55.9
CSS0030166 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-52 210.3 245 57.1
CSS0028647 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.7e-52 208.0 237 58.2
CSS0021221 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.3e-40 169.9 205 55.1
CSS0026530 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.3e-40 169.9 205 55.1
CSS0005205 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.8e-33 146.4 207 43.0
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-32 144.4 207 42.5
CSS0018151 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.2e-30 136.7 213 39.4
CSS0030640 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.0e-28 128.6 200 40.0
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.0e-24 115.9 200 39.0
Hma1.2p1_0104F.1_g050035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-22 109.4 176 38.1
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-19 100.9 173 36.4
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.6e-18 94.7 174 33.3
Rhsim06G0106500 Rhododendron simsii HOM05D007604 ORTHO05D000013 9.6e-18 94.7 92 53.3
CSS0005720 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.7e-17 92.4 191 33.5
Lj2g0013559 Lotus japonicus HOM05D000017 ORTHO05D000013 3.1e-16 89.7 173 31.8
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 6.8e-16 88.6 176 34.7
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.8e-16 88.6 162 33.3
Rhsim06G0100900 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.6e-15 86.7 77 57.1
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-15 86.3 263 30.0
CSS0028814 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.9e-15 84.7 198 33.3
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.4e-13 80.9 147 33.3
Dinv05752 Davidia involucrata HOM05D007604 ORTHO05D008966 2.4e-13 80.1 148 31.8
Rhsim13G0068100 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.0e-12 75.5 166 30.1
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-11 74.7 243 28.4
Rhsim08G0098700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-11 74.3 180 28.3
CSS0000907 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.5e-10 70.9 170 32.4
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 3.3e-10 69.7 144 31.2
Lj3g0025866 Lotus japonicus HOM05D000017 ORTHO05D000013 4.3e-10 69.3 186 28.0
Hma1.2p1_0564F.1_g179090 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 1.6e-09 67.4 94 33.0
Rhsim08G0130100 Rhododendron simsii HOM05D000187 ORTHO05D000230 2.1e-09 67.0 172 34.9
Dinv13083 Davidia involucrata HOM05D007604 ORTHO05D008966 4.8e-09 65.9 79 39.2
Lj5g0026532 Lotus japonicus HOM05D000017 ORTHO05D000013 1.1e-08 64.7 161 27.3
Dinv24728 Davidia involucrata HOM05D000017 ORTHO05D008966 3.4e-07 59.7 109 24.8
Actinidia20218 Actinidia chinensis HOM05D000017 ORTHO05D008966 7.6e-07 58.5 37 67.6
Atru.chr8.1311 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-06 57.8 147 27.9
Cc06_g15030 Coffea canephora HOM05D000017 ORTHO05D000013 1.3e-06 57.8 167 26.3
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-06 57.4 150 24.0
Nitab4.5_0000419g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.9e-06 55.8 87 34.5
Atru.chr6.1096 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-06 55.5 163 28.2


User provided reference genes

Program Settings