Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.7e-135 485.3 242 100.0
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.7e-62 241.5 230 60.0
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.1e-55 219.9 134 77.6
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 7.9e-55 218.0 153 70.6
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.0e-54 217.6 172 65.1
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.0e-54 217.6 233 51.5
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 5.1e-54 215.3 118 83.9
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 2.5e-53 213.0 227 51.5
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.7e-53 211.8 170 62.9
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 1.6e-52 210.3 219 51.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.6e-52 210.3 227 54.2
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 3.7e-52 209.1 232 50.4
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 1.8e-51 206.8 227 52.4
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 2.4e-51 206.5 235 49.4
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 3.1e-51 206.1 216 52.3
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 3.1e-51 206.1 227 52.9
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 5.3e-51 205.3 238 49.2
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.3e-51 205.3 227 52.4
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 9.0e-51 204.5 242 49.2
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 1.2e-50 204.1 238 50.0
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 1.2e-50 204.1 238 50.8
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.5e-50 203.8 236 50.0
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 2.0e-50 203.4 235 48.9
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 2.6e-50 203.0 221 50.2
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 2.6e-50 203.0 238 50.8
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 2.6e-50 203.0 222 47.7
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 4.5e-50 202.2 237 47.7
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 5.9e-50 201.8 237 48.1
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 5.9e-50 201.8 236 49.2
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 7.7e-50 201.4 236 46.2
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 7.7e-50 201.4 236 46.2
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.0e-49 201.1 118 76.3
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 1.0e-49 201.1 232 49.6
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.0e-49 201.1 235 47.2
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.7e-49 200.3 238 50.4
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 1.7e-49 200.3 235 45.5
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 2.2e-49 199.9 231 47.6
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 3.8e-49 199.1 237 46.8
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 3.8e-49 199.1 236 45.8
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 6.5e-49 198.4 235 51.9
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.5e-49 198.4 237 49.8
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 6.5e-49 198.4 230 48.7
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.1e-48 197.6 269 41.6
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 1.4e-48 197.2 231 47.2
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 2.5e-48 196.4 232 48.7
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 4.2e-48 195.7 237 48.1
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 5.5e-48 195.3 236 47.9
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 9.4e-48 194.5 234 45.3
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.2e-47 194.1 231 48.1
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 2.1e-47 193.4 233 50.6
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 2.7e-47 193.0 237 48.5
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.7e-47 193.0 249 48.6
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 2.7e-47 193.0 239 47.3
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 3.6e-47 192.6 234 47.0
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 6.1e-47 191.8 224 46.4
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 6.1e-47 191.8 232 47.4
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 7.9e-47 191.4 233 50.2
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 7.9e-47 191.4 150 62.7
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.0e-46 191.0 233 47.6
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.0e-46 191.0 237 45.6
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.4e-46 190.7 233 47.2
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.4e-46 190.7 233 47.2
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.4e-46 190.7 233 47.2
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 2.3e-46 189.9 233 47.2
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 2.3e-46 189.9 233 47.2
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 3.0e-46 189.5 235 44.3
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 3.0e-46 189.5 121 75.2
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 3.9e-46 189.1 233 47.2
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 5.1e-46 188.7 234 47.9
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 5.1e-46 188.7 220 45.9
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 5.1e-46 188.7 226 46.9
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 6.7e-46 188.3 112 73.2
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 6.7e-46 188.3 234 47.9
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 8.8e-46 188.0 234 47.9
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 1.1e-45 187.6 239 44.8
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 2.0e-45 186.8 199 50.8
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 2.5e-45 186.4 237 45.6
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 2.5e-45 186.4 226 46.9
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 2.5e-45 186.4 119 71.4
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 5.7e-45 185.3 116 69.8
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 5.7e-45 185.3 199 46.7
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 7.4e-45 184.9 232 45.7
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 9.7e-45 184.5 234 46.2
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 9.7e-45 184.5 184 54.9
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 9.7e-45 184.5 228 46.9
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 6.3e-44 181.8 246 45.9
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.8e-43 180.3 240 43.8
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 5.9e-42 175.3 150 55.3
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 3.2e-40 169.5 154 53.9
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 7.2e-40 168.3 119 63.0
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 9.4e-40 167.9 203 45.3
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 9.4e-40 167.9 232 41.8
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.1e-39 166.8 220 43.2
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 9.7e-37 157.9 238 39.1
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 4.7e-31 139.0 230 39.6
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 2.3e-30 136.7 204 38.2
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 5.3e-27 125.6 173 42.8
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.0e-25 121.3 235 32.3
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.5e-24 116.7 161 43.5
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.7e-23 113.2 187 41.2
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 4.7e-23 112.5 185 38.4
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 8.8e-22 108.2 186 38.2
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 2.0e-21 107.1 108 44.4
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 3.4e-21 106.3 88 60.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.4e-19 100.9 173 39.3
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 2.7e-18 96.7 173 39.3
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.9e-17 93.2 261 30.3
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.9e-16 90.5 159 37.7
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 4.0e-14 82.8 64 59.4
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 8.8e-14 81.6 45 86.7
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 2.8e-12 76.6 171 31.0
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 1.6e-10 70.9 157 30.6
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 2.9e-09 66.6 37 73.0
TAR622G1422 Trochodendron aralioides HOM05D000047 ORTHO05D001383 4.0e-06 56.2 49 51.0


User provided reference genes

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