Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 3.7e-191 671.4 347 100.0
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.6e-67 260.0 227 61.2
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.1e-65 254.6 227 61.7
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 8.1e-61 238.4 231 58.4
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.4e-59 233.0 227 55.9
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.4e-57 227.6 229 55.5
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 1.3e-47 194.5 228 48.2
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.9e-46 190.7 235 48.9
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 9.6e-46 188.3 234 49.1
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.3e-45 188.0 230 47.0
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.6e-45 187.6 232 48.3
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 1.6e-45 187.6 233 50.2
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 8.1e-45 185.3 230 47.8
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.1e-44 184.9 228 45.2
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 6.9e-44 182.2 231 47.6
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.2e-43 181.4 242 43.8
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.5e-43 181.0 228 44.7
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.5e-43 179.5 228 44.7
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 5.8e-43 179.1 233 47.2
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.0e-42 178.3 231 45.9
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.0e-42 178.3 230 47.8
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.0e-42 178.3 230 47.0
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.7e-42 177.6 232 43.5
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.2e-42 177.2 229 45.9
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 8.4e-42 175.3 251 45.8
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 2.1e-40 170.6 230 44.3
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 4.6e-40 169.5 231 40.7
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 1.8e-39 167.5 237 44.3
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 3.0e-39 166.8 228 40.8
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.0e-39 166.8 228 42.5
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 3.9e-39 166.4 237 43.0
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.1e-38 164.9 229 43.2
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 1.9e-38 164.1 232 43.1
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 4.3e-38 162.9 231 43.3
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.3e-37 161.4 231 43.3
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 1.3e-37 161.4 230 40.0
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 1.6e-37 161.0 228 41.7
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 2.1e-37 160.6 239 43.1
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 2.1e-37 160.6 230 41.3
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 1.1e-36 158.3 232 43.1
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 1.1e-36 158.3 230 40.9
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 3.1e-36 156.8 232 41.4
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.1e-36 156.8 232 41.4
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 4.1e-36 156.4 224 42.9
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 5.3e-36 156.0 231 43.3
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.0e-35 154.1 238 40.8
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 3.4e-35 153.3 231 39.4
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.6e-35 152.1 238 39.1
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.7e-34 151.0 235 38.7
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.2e-34 150.6 232 40.1
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 3.8e-34 149.8 234 40.6
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.8e-34 149.8 231 40.3
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 5.0e-34 149.4 235 41.7
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.4e-33 147.9 243 37.0
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.9e-33 147.5 178 48.9
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 2.5e-33 147.1 239 37.7
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 4.2e-33 146.4 230 39.1
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 7.1e-33 145.6 244 36.9
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 7.1e-33 145.6 241 42.3
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 7.1e-33 145.6 238 39.5
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 9.3e-33 145.2 235 37.9
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.6e-32 144.4 237 39.7
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 1.6e-32 144.4 234 41.0
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 2.1e-32 144.1 231 42.0
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 6.1e-32 142.5 233 36.9
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 6.1e-32 142.5 229 38.0
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 7.9e-32 142.1 236 37.7
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.8e-31 141.0 235 36.6
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 5.1e-31 139.4 211 43.6
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 1.5e-30 137.9 228 38.2
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 1.9e-30 137.5 230 37.8
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 2.5e-30 137.1 231 38.1
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 6.3e-29 132.5 231 40.3
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 8.2e-29 132.1 230 38.7
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 8.2e-29 132.1 229 37.6
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 4.1e-28 129.8 230 40.4
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 2.6e-27 127.1 234 38.5
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 3.4e-27 126.7 259 35.9
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 4.5e-27 126.3 231 34.2
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 5.9e-27 125.9 233 34.8
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 1.0e-26 125.2 242 35.1
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 8.5e-26 122.1 248 34.3
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 8.5e-26 122.1 238 38.7
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 7.2e-25 119.0 248 33.9
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 3.6e-24 116.7 225 31.6
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 3.6e-24 116.7 225 31.6
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 4.6e-24 116.3 247 36.8
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 6.1e-24 115.9 232 31.9
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 3.0e-23 113.6 88 68.2
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 3.9e-23 113.2 242 33.9
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 3.9e-23 113.2 242 34.3
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 5.7e-22 109.4 240 35.4
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 6.3e-21 105.9 246 34.6
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 6.3e-21 105.9 147 44.2
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 1.4e-20 104.8 212 32.5
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 1.4e-20 104.8 239 29.7
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.4e-20 104.8 219 36.1
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.2e-19 101.7 219 32.9
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 5.0e-18 96.3 231 29.9
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 8.5e-18 95.5 156 38.5
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.1e-17 95.1 189 37.6
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.2e-17 93.2 142 41.5
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 7.2e-17 92.4 231 30.7
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.9e-15 86.7 209 34.0
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 5.1e-15 86.3 218 32.1
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 6.7e-15 85.9 181 33.7
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 2.6e-14 84.0 238 30.7
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 5.7e-14 82.8 231 29.4
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 2.8e-13 80.5 88 54.5
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.8e-12 77.8 234 29.1
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.5e-11 74.7 236 28.8
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.0e-11 74.3 84 47.6
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 4.5e-11 73.2 218 29.4
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 1.3e-10 71.6 88 44.3
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 6.5e-10 69.3 110 45.5
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-09 68.6 75 49.3
CAN.G149.33 Capsicum annuum HOM05D001546 ORTHO05D015824 1.1e-09 68.6 73 50.7
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 1.5e-09 68.2 70 42.9
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.5e-09 68.2 196 31.6
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.9e-09 67.8 96 41.7
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 3.2e-09 67.0 196 31.6
Actinidia15113 Actinidia chinensis HOM05D003570 ORTHO05D004207 4.2e-09 66.6 51 64.7
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.2e-08 65.1 147 29.3
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-08 64.7 75 40.0
BcaC02g12092 Brassica carinata HOM05D003570 ORTHO05D004207 1.4e-07 61.6 54 51.9
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 2.3e-07 60.8 74 40.5
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 3.0e-07 60.5 104 36.5
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 5.2e-07 59.7 278 27.0
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 2.0e-06 57.8 50 58.0
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 2.0e-06 57.8 89 42.7
BolC4t26886H Brassica oleracea HOM05D003570 ORTHO05D004207 3.3e-06 57.0 61 47.5
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 3.3e-06 57.0 36 75.0
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 4.4e-06 56.6 73 41.1
Hund04894 Selenicereus undatus HOM05D003570 ORTHO05D004207 7.5e-06 55.8 54 51.9


User provided reference genes

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