Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.2e-99 366.3 564 100.0
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 1.4e-49 201.8 169 63.9
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.7e-47 194.9 172 63.4
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.7e-47 194.9 173 61.8
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.7e-47 194.9 173 61.8
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.9e-43 181.4 172 55.8
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 2.3e-41 174.5 171 54.4
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 2.3e-41 174.5 171 54.4
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 6.8e-41 172.9 172 55.2
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 3.7e-39 167.2 170 51.8
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 1.9e-38 164.9 164 57.3
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 5.4e-38 163.3 172 53.5
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.3e-36 157.9 175 52.6
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 6.6e-36 156.4 168 51.2
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.6e-36 156.0 174 49.4
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 8.6e-36 156.0 171 54.4
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 3.3e-35 154.1 168 52.4
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 2.8e-34 151.0 176 47.7
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 3.6e-34 150.6 171 51.5
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 8.0e-34 149.4 168 49.4
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 9.8e-32 142.5 173 50.3
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 1.7e-31 141.7 172 50.0
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 5.4e-30 136.7 169 42.6
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 4.6e-29 133.7 168 48.2
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 1.3e-28 132.1 152 47.4
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 3.0e-28 131.0 166 47.0
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 8.6e-28 129.4 166 45.2
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 1.5e-27 128.6 166 45.8
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.5e-27 128.6 169 44.4
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 4.3e-27 127.1 172 45.3
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 1.6e-26 125.2 172 46.5
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 2.8e-26 124.4 177 43.5
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 8.1e-26 122.9 161 43.5
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.4e-25 122.1 175 41.7
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 2.3e-25 121.3 172 46.5
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 3.1e-25 120.9 170 41.2
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 8.9e-25 119.4 182 41.8
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-24 118.6 174 41.4
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-24 118.6 174 41.4
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 3.4e-24 117.5 174 41.4
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 4.4e-24 117.1 181 40.3
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 5.8e-24 116.7 169 45.6
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 7.6e-24 116.3 168 45.2
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 7.6e-24 116.3 174 40.8
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 7.6e-24 116.3 128 48.4
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.7e-23 115.2 97 59.8
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 4.9e-23 113.6 108 52.8
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.1e-22 112.5 181 40.3
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 1.2e-21 109.0 176 40.9
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 2.1e-21 108.2 178 40.4
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 3.5e-21 107.5 168 41.7
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 7.8e-21 106.3 98 57.1
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 7.8e-21 106.3 167 41.9
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 3.0e-20 104.4 174 40.8
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 1.1e-19 102.4 107 51.4
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 1.9e-19 101.7 168 38.1
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.9e-19 101.7 136 44.1
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 5.6e-19 100.1 222 34.2
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 7.3e-19 99.8 136 43.4
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 7.3e-19 99.8 154 40.9
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 1.6e-18 98.6 145 42.8
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 2.1e-18 98.2 168 36.9
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 8.1e-18 96.3 175 38.9
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 1.4e-17 95.5 167 37.7
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 1.8e-17 95.1 169 36.1
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 1.8e-17 95.1 169 36.1
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 1.5e-16 92.0 176 34.7
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 7.6e-16 89.7 174 39.1
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.7e-15 88.6 174 36.2
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 2.9e-15 87.8 57 64.9
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 8.4e-15 86.3 57 66.7
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.9e-14 85.1 129 41.1
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 1.2e-13 82.4 169 34.3
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 1.6e-13 82.0 168 36.3
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 1.6e-13 82.0 175 35.4
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 3.5e-13 80.9 134 39.6
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 2.3e-12 78.2 150 38.0
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 5.1e-12 77.0 97 45.4
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 4.8e-10 70.5 73 50.7
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 4.8e-10 70.5 43 72.1
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 8.1e-10 69.7 43 69.8
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 3.1e-09 67.8 43 69.8
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 5.3e-09 67.0 139 35.3
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 5.3e-09 67.0 180 29.4
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 6.9e-09 66.6 80 48.8
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 1.2e-08 65.9 43 65.1
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 1.9e-06 58.5 217 27.2
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 3.2e-06 57.8 182 29.1


User provided reference genes

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