Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.4e-229 799.3 402 100.0
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.7e-191 670.2 416 82.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.1e-189 666.8 414 83.3
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 2.9e-187 658.7 412 82.3
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 5.5e-186 654.4 409 82.9
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.0e-179 633.6 401 81.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.8e-176 622.9 395 78.5
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 8.8e-176 620.5 411 78.1
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.1e-175 620.2 390 79.7
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 1.5e-175 619.8 397 79.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.7e-174 616.3 403 78.4
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.8e-173 612.8 405 75.6
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.6e-172 609.8 393 77.1
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 2.0e-172 609.4 393 77.6
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 3.5e-172 608.6 408 77.5
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.7e-171 606.3 395 77.7
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 2.7e-169 599.0 394 76.4
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 4.7e-169 598.2 397 77.1
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 8.0e-169 597.4 394 77.2
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 8.0e-169 597.4 394 75.4
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.4e-168 596.7 400 75.8
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.4e-168 596.7 403 75.7
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.4e-168 596.7 394 76.9
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 1.4e-168 596.7 390 77.9
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-168 596.3 388 76.8
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.8e-168 596.3 390 77.4
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 3.0e-168 595.5 398 76.9
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 8.8e-168 594.0 404 74.5
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.1e-167 593.6 388 76.3
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 2.0e-167 592.8 392 76.0
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 2.6e-167 592.4 392 76.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.3e-167 592.0 398 75.6
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 4.4e-167 591.7 396 75.3
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 3.7e-166 588.6 404 75.5
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.8e-166 588.2 401 74.1
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 6.3e-166 587.8 394 74.9
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 8.2e-166 587.4 396 73.2
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 7.0e-165 584.3 392 74.7
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.2e-164 583.6 389 76.1
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.5e-164 582.0 399 73.7
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.5e-164 582.0 402 73.6
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.0e-163 580.5 403 75.4
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.9e-163 578.9 374 79.4
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.8e-163 578.6 400 72.2
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 5.0e-163 578.2 391 74.4
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.9e-162 576.2 381 74.8
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 7.2e-162 574.3 389 75.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 7.2e-162 574.3 402 72.9
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 9.4e-162 573.9 402 73.6
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 9.4e-162 573.9 389 75.1
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.6e-161 573.2 403 73.7
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 4.7e-161 571.6 390 73.6
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.0e-160 570.5 389 74.8
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.0e-160 570.5 398 73.9
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.3e-160 569.3 390 73.3
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.0e-160 568.9 388 76.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 5.2e-160 568.2 336 81.5
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 5.2e-160 568.2 394 72.6
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 5.2e-160 568.2 399 72.4
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 8.8e-160 567.4 392 74.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.2e-159 567.0 390 73.1
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 2.0e-159 566.2 390 72.6
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.4e-159 565.5 339 82.0
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 3.4e-159 565.5 423 70.0
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 5.7e-159 564.7 397 70.8
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 7.5e-159 564.3 339 81.7
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 7.5e-159 564.3 339 81.7
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.5e-159 564.3 403 70.5
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 9.8e-159 563.9 339 82.0
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.7e-158 563.1 384 72.7
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.3e-158 561.2 332 81.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.4e-157 560.1 371 73.6
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.8e-157 559.7 400 71.8
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 2.4e-157 559.3 395 73.2
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 3.1e-157 558.9 394 70.8
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 7.0e-157 557.8 327 82.0
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.0e-156 556.2 396 69.7
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 3.5e-156 555.4 375 71.7
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 3.5e-156 555.4 373 72.7
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 3.5e-156 555.4 373 72.7
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 3.5e-156 555.4 454 65.0
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 4.5e-156 555.1 347 75.8
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.9e-155 552.4 375 71.5
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.9e-155 552.4 373 72.1
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 2.9e-155 552.4 338 77.5
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.0e-155 551.6 373 71.8
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.0e-155 551.6 373 71.8
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 3.6e-153 545.4 329 78.4
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 4.7e-153 545.0 376 71.0
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 4.0e-152 542.0 364 70.9
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 4.4e-151 538.5 399 67.7
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 1.4e-149 533.5 392 70.4
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.4e-149 531.6 369 73.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 7.0e-149 531.2 405 65.7
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 4.5e-148 528.5 299 86.0
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.9e-147 525.8 392 71.7
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.3e-146 521.9 397 68.3
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 2.8e-145 519.2 403 67.5
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.8e-144 516.5 428 65.4
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 4.9e-142 508.4 342 76.3
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.9e-142 508.4 385 69.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 4.7e-137 491.9 341 71.3
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.2e-135 487.3 363 67.8
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.1e-130 470.7 337 73.6
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.2e-129 467.2 332 66.6
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.8e-128 463.4 323 67.8
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 2.2e-126 456.4 332 66.3
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 9.5e-122 441.0 330 64.5
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 4.3e-114 415.6 338 65.7
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 2.9e-110 402.9 291 67.4
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 2.3e-107 393.3 278 73.7
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 2.9e-86 323.2 302 53.3
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 4.2e-85 319.3 302 51.7
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.3e-83 314.3 288 54.5
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 4.3e-82 309.3 291 57.0
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.5e-77 293.5 194 73.7
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.1e-68 263.8 181 72.9
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.9e-55 219.2 186 60.8
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.6e-50 203.8 130 71.5
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 2.4e-40 170.6 143 65.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 8.3e-33 145.6 103 66.0
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.8e-28 130.6 137 51.8
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.6e-23 114.8 129 55.0
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.3e-21 106.7 74 68.9
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.6e-21 106.3 161 39.1
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.8e-18 95.5 106 48.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.7e-17 93.6 51 82.4


User provided reference genes

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