Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.5e-40 169.1 86 100.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 4.8e-31 137.5 86 79.1
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.3e-28 129.4 86 76.7
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 4.2e-27 124.4 86 74.4
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 5.5e-27 124.0 86 72.1
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 2.1e-26 122.1 86 72.1
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 6.1e-26 120.6 86 70.9
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.4e-25 119.4 86 72.1
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 2.3e-25 118.6 80 72.5
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 3.0e-25 118.2 86 69.8
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 5.2e-25 117.5 86 69.8
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 5.2e-25 117.5 86 69.8
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 1.2e-24 116.3 86 70.9
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.5e-24 115.9 86 67.4
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 2.6e-24 115.2 86 65.1
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 2.6e-24 115.2 86 68.6
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.6e-24 115.2 86 68.6
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.3e-24 114.8 86 66.3
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 4.4e-24 114.4 86 64.0
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 5.7e-24 114.0 86 69.8
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 5.7e-24 114.0 86 66.3
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 7.5e-24 113.6 80 70.0
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 9.7e-24 113.2 86 66.3
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 9.7e-24 113.2 87 69.0
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 9.7e-24 113.2 87 69.0
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 9.7e-24 113.2 87 69.0
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 9.7e-24 113.2 87 69.0
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 9.7e-24 113.2 87 69.0
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 66.3
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.7e-23 112.5 86 67.4
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 2.2e-23 112.1 86 62.8
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 2.2e-23 112.1 86 64.0
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 4.8e-23 110.9 86 67.4
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 6.3e-23 110.5 86 62.8
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.1e-22 109.8 87 66.7
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 1.1e-22 109.8 86 64.0
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 66.3
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 1.4e-22 109.4 86 64.0
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 1.8e-22 109.0 86 62.8
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 59.3
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 65.1
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 2.4e-22 108.6 85 64.7
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 3.1e-22 108.2 86 58.1
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 4.1e-22 107.8 85 67.1
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 5.3e-22 107.5 86 61.6
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 5.3e-22 107.5 87 63.2
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 5.3e-22 107.5 86 59.3
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 9.1e-22 106.7 86 58.1
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 58.1
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 1.2e-21 106.3 86 65.1
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 2.0e-21 105.5 86 61.6
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 2.7e-21 105.1 84 61.9
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 2.7e-21 105.1 86 64.0
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 2.7e-21 105.1 86 66.3
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 5.9e-21 104.0 87 58.6
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 58.1
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 59.3
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 64.0
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 7.7e-21 103.6 83 65.1
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 7.7e-21 103.6 87 59.8
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 7.7e-21 103.6 87 58.6
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 7.7e-21 103.6 83 57.8
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 1.0e-20 103.2 86 66.3
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 1.0e-20 103.2 87 63.2
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 1.0e-20 103.2 86 59.3
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.3e-20 102.8 75 64.0
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 60.5
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 3.8e-20 101.3 88 61.4
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 5.0e-20 100.9 86 61.6
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 6.5e-20 100.5 86 60.5
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 60.5
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 8.5e-20 100.1 85 60.0
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 8.5e-20 100.1 86 64.0
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 58.1
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 1.5e-19 99.4 82 58.5
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 2.5e-19 98.6 83 59.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 59.3
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 59.3
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 60.5
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 7.2e-19 97.1 83 56.6
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 9.4e-19 96.7 91 56.0
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 59.3
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 9.4e-19 96.7 82 57.3
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 60.5
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 59.3
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 1.6e-18 95.9 82 56.1
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.6e-18 95.9 86 59.3
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 4.7e-18 94.4 86 54.7
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 6.1e-18 94.0 85 55.3
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.0e-17 93.2 86 58.1
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.8e-17 92.4 74 60.8
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.2e-17 90.9 79 58.2
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 5.2e-17 90.9 86 54.7
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 1.7e-15 85.9 86 51.2
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 1.7e-15 85.9 83 53.0
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 4.8e-15 84.3 85 54.1
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 7.0e-14 80.5 81 53.1
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 9.1e-14 80.1 66 56.1
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 1.0e-12 76.6 86 48.8
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.3e-12 76.3 86 48.8
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 2.9e-12 75.1 89 47.2
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 3.8e-12 74.7 86 46.5
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 3.3e-11 71.6 174 31.6
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.1e-10 68.9 89 51.7
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 4.7e-10 67.8 52 65.4
SHI06100 Sapria himalayana HOM05D006634 ORTHO05D008282 3.0e-09 65.1 63 54.0
Actinidia20457 Actinidia chinensis HOM05D006634 ORTHO05D008282 8.9e-09 63.5 65 50.8
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.5e-08 62.8 41 78.0
PGSC0003DMG400008051 Solanum tuberosum HOM05D006634 ORTHO05D008282 4.4e-08 61.2 66 47.0
Lj1A192T37 Lonicera japonica HOM05D006634 ORTHO05D008282 5.7e-08 60.8 43 69.8
Sc06g0010190 Simmondsia chinensis HOM05D006634 ORTHO05D008282 7.5e-08 60.5 47 70.2
A04p21560 Brassica napus HOM05D006634 ORTHO05D008282 2.2e-07 58.9 42 61.9
Nitab4.5_0014490g0010 Nicotiana tabacum HOM05D006634 ORTHO05D008282 6.3e-07 57.4 41 68.3
HPP92_022576 Vanilla planifolia HOM05D006634 ORTHO05D008282 2.4e-06 55.5 45 62.2
arahy.Tifrunner.gnm1.ann1.RL700P Arachis hypogaea HOM05D006503 ORTHO05D008116 4.1e-06 54.7 63 47.6
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 9.2e-06 53.5 91 34.1


User provided reference genes

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