Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031928 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009914 1.7e-39 165.6 86 100.0
Dinv12284 Davidia involucrata HOM05D000032 ORTHO05D009914 3.4e-08 61.6 32 87.5
Hma1.2p1_0170F.1_g075240 Hydrangea macrophylla HOM05D000032 ORTHO05D009914 5.7e-08 60.8 32 87.5
Rhsim01G0243700 Rhododendron simsii HOM05D000032 ORTHO05D009914 5.7e-08 60.8 32 87.5
vmacro14643 Vaccinium macrocarpon HOM05D000032 ORTHO05D009914 5.7e-08 60.8 32 90.6
Lj1A113T56 Lonicera japonica HOM05D000032 ORTHO05D009914 1.7e-07 59.3 32 84.4
TAR633G2770 Trochodendron aralioides HOM05D000032 ORTHO05D009914 1.7e-07 59.3 32 87.5
Aqoxy1G01255 Aquilegia oxysepala HOM05D000032 ORTHO05D009914 2.8e-07 58.5 32 87.5
Cpa.g.sc2.289 Carica papaya HOM05D000032 ORTHO05D009914 4.9e-07 57.8 32 84.4
CiPaw.14G049900 Carya illinoinensis HOM05D000032 ORTHO05D009914 4.9e-07 57.8 32 84.4
Lalb_Chr20g0117331 Lupinus albus HOM05D000032 ORTHO05D009914 4.9e-07 57.8 62 53.2
PSO170G3634 Papaver somniferum HOM05D000032 ORTHO05D009914 6.3e-07 57.4 32 81.2
CAN.G2497.1 Capsicum annuum HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
CAN.G3.29 Capsicum annuum HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
FAN16G3520 Fragaria x ananassa HOM05D000032 ORTHO05D009914 8.3e-07 57.0 78 44.9
FAN21G0412 Fragaria x ananassa HOM05D000032 ORTHO05D009914 8.3e-07 57.0 31 83.9
Nitab4.5_0004884g0020 Nicotiana tabacum HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
Nitab4.5_0005901g0020 Nicotiana tabacum HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
PSO017G6307 Papaver somniferum HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
Peaxi162Scf00395g00118 Petunia axillaris HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
Prupe.6G040300 Prunus persica HOM05D000032 ORTHO05D009914 8.3e-07 57.0 31 83.9
RcHm_v2.0_Chr5g0073371 Rosa chinensis HOM05D000032 ORTHO05D009914 8.3e-07 57.0 31 83.9
Solyc09g015930.3 Solanum lycopersicum HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
Sopen09g010040 Solanum pennellii HOM05D000032 ORTHO05D009914 8.3e-07 57.0 32 81.2
FvH4_3g40620 Fragaria vesca HOM05D000032 ORTHO05D009914 1.1e-06 56.6 78 44.9
FAN11G0883 Fragaria x ananassa HOM05D000032 ORTHO05D009914 1.1e-06 56.6 78 44.9
Manes.18G127000 Manihot esculenta HOM05D000032 ORTHO05D009914 1.1e-06 56.6 32 78.1
Nn2g10281 Nelumbo nucifera HOM05D000032 ORTHO05D009914 1.1e-06 56.6 44 65.9
Cfa011839 Carpinus fangiana HOM05D000032 ORTHO05D009914 1.4e-06 56.2 32 84.4
Ca_15065_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009914 1.4e-06 56.2 32 78.1
FAN25G2921 Fragaria x ananassa HOM05D000032 ORTHO05D009914 1.4e-06 56.2 31 80.6
Lj6g0027261 Lotus japonicus HOM05D000032 ORTHO05D009914 1.4e-06 56.2 32 78.1
Atru.chr10.2334 Acer truncatum HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 81.2
arahy.Tifrunner.gnm1.ann1.589SZX Arachis hypogaea HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 78.1
arahy.Tifrunner.gnm1.ann1.VAHG0I Arachis hypogaea HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 78.1
Glyma.18G051700 Glycine max HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 78.1
Medtr3g467550 Medicago truncatula HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 78.1
Psat5g147360 Pisum sativum HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 78.1
SEGI_32378 Sequoiadendron giganteum HOM05D000032 ORTHO05D009914 2.4e-06 55.5 38 68.4
TPR.G13904 Trifolium pratense HOM05D000032 ORTHO05D009914 2.4e-06 55.5 32 78.1
CDE06G0222 Ceratophyllum demersum HOM05D000032 ORTHO05D009914 3.1e-06 55.1 32 75.0
ATR1127G115 Amborella trichopoda HOM05D000032 ORTHO05D009914 4.1e-06 54.7 44 61.4
MD03G1050800 Malus domestica HOM05D000032 ORTHO05D009914 4.1e-06 54.7 31 80.6
GSVIVG01024552001 Vitis vinifera HOM05D000032 ORTHO05D009914 4.1e-06 54.7 32 81.2
Cc00_g18890 Coffea canephora HOM05D000032 ORTHO05D009914 5.4e-06 54.3 32 75.0
DCAR_004794 Daucus carota HOM05D000032 ORTHO05D009914 5.4e-06 54.3 32 78.1
Phvul.006G079800 Phaseolus vulgaris HOM05D000032 ORTHO05D009914 5.4e-06 54.3 32 75.0
SEGI_16448 Sequoiadendron giganteum HOM05D000032 ORTHO05D009914 5.4e-06 54.3 32 81.2
VMungo0540G1754 Vigna mungo HOM05D000032 ORTHO05D009914 5.4e-06 54.3 32 75.0


User provided reference genes

Program Settings