Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031911 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.0e-34 146.7 76 100.0
CSS0021707 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 6.2e-30 133.7 90 81.1
CSS0026516 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.2e-29 130.6 80 90.0
CSS0036107 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.2e-27 125.2 85 82.4
Actinidia19298 Actinidia chinensis HOM05D001756 ORTHO05D001581 4.4e-12 74.3 68 60.3
CSS0014839 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.9e-12 73.2 74 63.5
CSS0047712 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.9e-12 73.2 74 63.5
Rhsim06G0064100 Rhododendron simsii HOM05D001756 ORTHO05D001581 6.4e-11 70.5 83 53.0
vmacro21422 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.2e-09 66.2 79 48.1
Atru.chr13.861 Acer truncatum HOM05D001756 ORTHO05D001581 1.6e-09 65.9 75 52.0
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 6.0e-09 63.9 78 47.4
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 7.8e-09 63.5 76 52.6
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 7.8e-09 63.5 78 53.8
Rhsim06G0064200 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.0e-08 63.2 75 50.7
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 1.3e-08 62.8 80 48.8
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 1.3e-08 62.8 73 53.4
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 2.3e-08 62.0 76 51.3
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.3e-08 62.0 80 52.5
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.0e-08 61.6 78 48.7
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 3.0e-08 61.6 80 50.0
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.1e-08 60.8 79 48.1
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 5.1e-08 60.8 76 52.6
QL11p029356 Quercus lobata HOM05D001756 ORTHO05D001581 5.1e-08 60.8 82 47.6
Thhalv10010875m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 6.6e-08 60.5 76 50.0
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 6.6e-08 60.5 78 46.2
A09p42920 Brassica napus HOM05D001756 ORTHO05D001581 8.7e-08 60.1 76 50.0
BraA09t39759Z Brassica rapa HOM05D001756 ORTHO05D001581 8.7e-08 60.1 76 50.0
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 8.7e-08 60.1 79 48.1
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 8.7e-08 60.1 76 50.0
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 8.7e-08 60.1 76 47.4
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.1e-07 59.7 76 47.4
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.1e-07 59.7 76 47.4
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.1e-07 59.7 82 50.0
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.5e-07 59.3 83 49.4
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 1.9e-07 58.9 77 50.6
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.9e-07 58.9 81 50.6
Glyma.17G233500 Glycine max HOM05D001756 ORTHO05D001581 1.9e-07 58.9 80 52.5
BcaB01g00674 Brassica carinata HOM05D001756 ORTHO05D001581 2.5e-07 58.5 67 53.7
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 2.5e-07 58.5 76 50.0
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 2.5e-07 58.5 76 50.0
BcaC07g39442 Brassica carinata HOM05D001756 ORTHO05D001581 3.3e-07 58.2 67 53.7
FAN23G1434 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.3e-07 58.2 84 46.4
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 3.3e-07 58.2 76 48.7
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 3.3e-07 58.2 75 52.0
Sc15g0005410 Simmondsia chinensis HOM05D001756 ORTHO05D001581 3.3e-07 58.2 74 50.0
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.3e-07 58.2 83 49.4
EL10Ac6g15597 Beta vulgaris HOM05D001756 ORTHO05D001581 4.3e-07 57.8 76 44.7
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 4.3e-07 57.8 80 48.8
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 4.3e-07 57.8 75 42.7
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 5.6e-07 57.4 81 51.9
CiPaw.07G172800 Carya illinoinensis HOM05D001756 ORTHO05D001581 5.6e-07 57.4 75 46.7
FvH4_2g03340 Fragaria vesca HOM05D001756 ORTHO05D001581 5.6e-07 57.4 82 43.9
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 5.6e-07 57.4 76 46.1
Lsat_1_v5_gn_3_86460 Lactuca sativa HOM05D001756 ORTHO05D001581 5.6e-07 57.4 72 44.4
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 5.6e-07 57.4 81 45.7
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 5.6e-07 57.4 82 43.9
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 5.6e-07 57.4 83 47.0
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 7.3e-07 57.0 78 47.4
FAN20G1648 Fragaria x ananassa HOM05D001756 ORTHO05D001581 7.3e-07 57.0 83 43.4
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 7.3e-07 57.0 81 50.6
THA.LOC104825794 Tarenaya hassleriana HOM05D001756 ORTHO05D015390 7.3e-07 57.0 72 48.6
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 7.3e-07 57.0 81 45.7
BcaB05g23153 Brassica carinata HOM05D001756 ORTHO05D001581 9.6e-07 56.6 67 52.2
AUR62004029 Chenopodium quinoa HOM05D001756 ORTHO05D001581 9.6e-07 56.6 75 44.0
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 9.6e-07 56.6 81 40.7
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 9.6e-07 56.6 81 40.7
Lsat_1_v5_gn_5_117161 Lactuca sativa HOM05D001756 ORTHO05D001581 9.6e-07 56.6 78 39.7
Phvul.007G047000 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 9.6e-07 56.6 76 47.4
RcHm_v2.0_Chr6g0248481 Rosa chinensis HOM05D001756 ORTHO05D001581 9.6e-07 56.6 82 47.6
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 9.6e-07 56.6 84 40.5
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 9.6e-07 56.6 81 50.6
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 1.2e-06 56.2 78 43.6
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 1.2e-06 56.2 84 44.0
FAN20G0846 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.2e-06 56.2 31 74.2
FAN27G1437 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.2e-06 56.2 77 48.1
Glyma.11G046000 Glycine max HOM05D001756 ORTHO05D001581 1.2e-06 56.2 74 47.3
AL5G29770 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 1.6e-06 55.8 80 46.2
FAN27G0458 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.6e-06 55.8 82 42.7
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 1.6e-06 55.8 76 47.4
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.1e-06 55.5 75 49.3
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.1e-06 55.5 77 45.5
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.1e-06 55.5 77 45.5
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 2.1e-06 55.5 76 44.7
Duzib132G0635 Durio zibethinus HOM05D001756 ORTHO05D001581 2.1e-06 55.5 49 55.1
Glyma.17G159000 Glycine max HOM05D001756 ORTHO05D001581 2.1e-06 55.5 74 41.9
PGSC0003DMG400025738 Solanum tuberosum HOM05D001756 ORTHO05D001581 2.1e-06 55.5 79 43.0
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 2.1e-06 55.5 81 42.0
Actinidia00357 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.8e-06 55.1 80 41.2
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 2.8e-06 55.1 79 46.8
AT3G49780 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 2.8e-06 55.1 80 46.2
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 2.8e-06 55.1 76 47.4
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 2.8e-06 55.1 76 47.4
FAN15G0430 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.8e-06 55.1 77 46.8
HanXRQChr03g0074741 Helianthus annuus HOM05D001756 ORTHO05D001581 2.8e-06 55.1 79 39.2
Manes.13G109600 Manihot esculenta HOM05D001756 ORTHO05D001581 2.8e-06 55.1 78 47.4
Psat2g172320 Pisum sativum HOM05D001756 ORTHO05D001581 2.8e-06 55.1 77 44.2
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.8e-06 55.1 82 42.7
SalBow2G0436 Salvia bowleyana HOM05D001756 ORTHO05D001581 2.8e-06 55.1 70 51.4
SalBow2G3148 Salvia bowleyana HOM05D001756 ORTHO05D001581 2.8e-06 55.1 70 51.4
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 2.8e-06 55.1 82 43.9
ECA232G1256 Erigeron canadensis HOM05D000549 ORTHO05D008331 3.6e-06 54.7 52 53.8
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 3.6e-06 54.7 73 46.6
Phvul.002G009300 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 3.6e-06 54.7 66 47.0
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 3.6e-06 54.7 74 41.9
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 3.6e-06 54.7 77 50.6
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 3.6e-06 54.7 81 46.9
AT2G22942 Arabidopsis thaliana HOM05D013041 ORTHO05D015390 4.7e-06 54.3 74 41.9
Cfa013750 Carpinus fangiana HOM05D001756 ORTHO05D001581 4.7e-06 54.3 86 43.0
CiPaw.08G051600 Carya illinoinensis HOM05D001756 ORTHO05D001581 4.7e-06 54.3 84 45.2
AUR62007537 Chenopodium quinoa HOM05D001756 ORTHO05D001581 4.7e-06 54.3 75 40.0
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.7e-06 54.3 84 45.2
Gohir.A05G211500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 4.7e-06 54.3 71 49.3
Solyc01g106830.4 Solanum lycopersicum HOM05D001756 ORTHO05D001581 4.7e-06 54.3 79 41.8
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 6.2e-06 53.9 83 45.8
CARHR279870 Cardamine hirsuta HOM05D001756 ORTHO05D001581 6.2e-06 53.9 73 47.9
Glyma.01G195700 Glycine max HOM05D001756 ORTHO05D001581 6.2e-06 53.9 74 45.9
Gohir.D05G214800 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.2e-06 53.9 71 49.3
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 6.2e-06 53.9 84 46.4
MD05G1105500 Malus domestica HOM05D001756 ORTHO05D001581 6.2e-06 53.9 84 41.7
Manes.18G048700 Manihot esculenta HOM05D001756 ORTHO05D001581 6.2e-06 53.9 76 44.7
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 6.2e-06 53.9 81 49.4
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 6.2e-06 53.9 81 44.4
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 6.2e-06 53.9 80 42.5
AT5G65870 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 8.1e-06 53.5 77 49.4
BcaC09g49971 Brassica carinata HOM05D001756 ORTHO05D001581 8.1e-06 53.5 67 50.7
FvH4_1g18100 Fragaria vesca HOM05D001756 ORTHO05D001581 8.1e-06 53.5 34 64.7
HanXRQChr03g0072941 Helianthus annuus HOM05D001756 ORTHO05D001581 8.1e-06 53.5 79 44.3
Lj5g0025862 Lotus japonicus HOM05D001756 ORTHO05D001581 8.1e-06 53.5 56 46.4
QL12p038416 Quercus lobata HOM05D001756 ORTHO05D001581 8.1e-06 53.5 82 45.1
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 8.1e-06 53.5 84 46.4


User provided reference genes

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