Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031901 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 8.1e-88 327.0 163 100.0
CSS0028152 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.0e-53 213.8 163 69.3
CSS0000863 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 3.9e-50 201.8 159 67.3
CSS0017908 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.6e-46 189.9 162 62.3
CSS0028650 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.0e-46 189.5 162 62.3
CSS0020709 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.5e-44 182.6 172 58.1
CSS0023034 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.6e-43 179.9 163 60.7
CSS0020839 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 3.0e-42 175.6 135 68.1
CSS0004988 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-28 130.2 199 42.2
CSS0008375 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.2e-27 127.1 219 42.9
CSS0030045 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.2e-27 127.1 219 42.9
CSS0043805 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-26 121.7 160 44.4
CSS0009355 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-26 121.3 199 41.7
CSS0028511 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D000001 1.3e-24 117.1 178 43.3
CSS0006020 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-24 115.5 164 43.3
CSS0041521 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D017724 3.7e-24 115.5 163 42.9
CSS0028520 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.1e-23 114.0 122 51.6
CSS0040722 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110166 3.2e-23 112.5 187 42.8
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 8.6e-21 104.4 169 42.0
CSS0030269 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D004772 2.1e-19 99.8 80 65.0
CSS0010648 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110099 6.8e-18 94.7 205 38.0
CSS0009795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-17 91.3 240 30.4
RhsimUnG0237200 Rhododendron simsii HOM05D000002 ORTHO05D013260 1.1e-15 87.4 120 44.2
CSS0024820 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-15 85.1 111 46.8
Atru.chr8.482 Acer truncatum HOM05D000002 ORTHO05D000001 5.0e-13 78.6 166 36.7
CSS0007783 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-13 77.8 239 29.3
CSS0014506 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-12 76.6 111 44.1
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 5.6e-12 75.1 140 37.9
Rhsim01G0085300 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.3e-12 74.7 88 48.9
CSS0017443 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 9.8e-09 64.3 96 43.8
Rhsim02G0139900 Rhododendron simsii HOM05D010463 ORTHO05D013260 1.9e-07 60.1 64 53.1


User provided reference genes

Program Settings