Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 8.9e-102 373.6 191 100.0
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.1e-94 348.6 195 94.4
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 3.3e-40 169.1 212 56.6
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 1.2e-37 160.6 228 52.6
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.0e-36 157.5 192 57.3
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 6.1e-34 148.3 232 46.1
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.4e-33 147.1 234 51.7
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 5.7e-32 141.7 279 42.7
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.8e-31 138.7 234 50.4
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 4.1e-30 135.6 239 45.6
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.0e-29 133.3 213 44.6
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 4.5e-29 132.1 226 46.0
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 1.0e-28 131.0 248 46.0
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 6.5e-28 128.3 164 55.5
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 6.5e-28 128.3 251 43.0
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 8.5e-28 127.9 258 42.6
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.1e-27 127.5 255 43.1
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 1.9e-27 126.7 250 42.8
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 7.2e-27 124.8 216 42.6
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.2e-26 124.0 236 42.8
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 7.9e-26 121.3 242 41.7
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 7.9e-26 121.3 247 43.3
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 1.0e-25 120.9 232 43.1
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-25 120.6 246 41.9
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-25 120.6 226 44.7
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.4e-25 120.6 259 43.6
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.3e-25 119.8 203 43.3
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 3.0e-25 119.4 262 41.2
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 8.8e-25 117.9 202 43.1
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 1.5e-24 117.1 175 48.0
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 2.0e-24 116.7 247 43.3
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 3.3e-24 115.9 229 41.0
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 1.7e-23 113.6 143 51.7
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 6.3e-23 111.7 241 41.1
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 1.1e-22 110.9 240 43.3
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-22 110.5 254 41.3
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 4.5e-21 105.5 264 39.0
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.7e-20 103.6 253 38.3
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.7e-20 103.6 255 40.0
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.2e-20 103.2 223 40.8
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.9e-19 100.1 220 38.6
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 1.9e-19 100.1 271 37.3
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 1.6e-18 97.1 135 45.9
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 2.1e-18 96.7 248 37.9
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 3.6e-18 95.9 189 44.4
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 4.7e-18 95.5 248 38.3
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 1.0e-17 94.4 221 38.0
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-17 94.0 249 39.0
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 1.8e-17 93.6 140 46.4
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 2.3e-17 93.2 185 41.1
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 2.3e-17 93.2 275 33.5
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 3.0e-17 92.8 249 37.8
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 4.0e-17 92.4 217 41.0
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 5.2e-17 92.0 131 49.6
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.2e-16 90.9 214 35.0
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.5e-16 90.5 220 37.7
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 2.0e-16 90.1 164 42.7
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 2.0e-16 90.1 211 37.0
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.7e-16 88.6 220 37.3
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 7.5e-16 88.2 242 37.6
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 9.7e-16 87.8 247 34.4
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 9.7e-16 87.8 220 36.4
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 1.3e-15 87.4 273 35.9
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 1.7e-15 87.0 205 38.0
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 2.2e-15 86.7 205 37.1
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 2.8e-15 86.3 267 34.5
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 2.8e-15 86.3 168 38.7
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 3.7e-15 85.9 220 38.2
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 6.3e-15 85.1 248 35.9
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 6.3e-15 85.1 249 36.5
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 6.3e-15 85.1 249 36.5
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 4.1e-14 82.4 117 50.4
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 5.3e-14 82.0 135 45.9
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 9.1e-14 81.3 133 43.6
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 1.2e-13 80.9 215 35.3
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 2.0e-13 80.1 180 39.4
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 3.5e-13 79.3 226 37.2
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 5.9e-13 78.6 121 43.0
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 1.9e-11 73.6 196 35.7
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 5.5e-11 72.0 172 34.3
AT1G20070 Arabidopsis thaliana HOM05D009961 ORTHO05D008483 1.6e-10 70.5 207 31.9
BolC7t42871H Brassica oleracea HOM05D009961 ORTHO05D008483 2.1e-10 70.1 210 32.4
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 3.6e-10 69.3 204 34.3
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 3.6e-10 69.3 204 34.3
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 3.6e-10 69.3 204 34.3
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 3.6e-10 69.3 242 34.7
Carub.0001s1960 Capsella rubella HOM05D009961 ORTHO05D008483 1.4e-09 67.4 212 33.5
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 5.2e-09 65.5 200 30.5
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 6.8e-09 65.1 198 34.3
AL1G32880 Arabidopsis lyrata HOM05D009961 ORTHO05D008483 8.8e-09 64.7 210 31.9
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 8.8e-09 64.7 207 32.4
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 1.2e-08 64.3 207 32.9
CARHR020550 Cardamine hirsuta HOM05D009961 ORTHO05D008483 1.2e-08 64.3 206 32.0
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 3.4e-08 62.8 198 34.3
BraA06t24726Z Brassica rapa HOM05D009961 ORTHO05D008483 9.8e-08 61.2 48 64.6
Sp1g17840 Schrenkiella parvula HOM05D009961 ORTHO05D008483 1.7e-07 60.5 206 30.1
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 8.3e-07 58.2 206 31.6
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.4e-06 57.4 199 35.7
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 1.4e-06 57.4 99 38.4
Thhalv10008606m.g Eutrema salsugineum HOM05D009961 ORTHO05D008483 1.8e-06 57.0 200 33.5
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 3.1e-06 56.2 88 46.6
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 3.1e-06 56.2 120 38.3
unitig_749.g13899 Utricularia gibba HOM05D007731 ORTHO05D008483 4.1e-06 55.8 169 32.0
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 7.0e-06 55.1 97 36.1
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.0e-06 55.1 97 36.1
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 7.0e-06 55.1 97 36.1
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 7.0e-06 55.1 107 36.4
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 7.0e-06 55.1 97 37.1
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 9.1e-06 54.7 84 41.7
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 9.1e-06 54.7 84 41.7


User provided reference genes

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