Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-56 222.6 107 100.0
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-56 222.6 107 100.0
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.4e-56 222.6 107 100.0
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 3.9e-38 161.4 107 75.7
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 6.2e-36 154.1 108 73.1
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.1e-35 153.3 98 77.6
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 1.1e-35 153.3 108 72.2
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 1.1e-35 153.3 108 72.2
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 1.1e-35 153.3 108 72.2
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.4e-35 152.9 108 73.1
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 6.9e-35 150.6 108 72.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 5.8e-34 147.5 112 71.4
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 2.9e-33 145.2 107 68.2
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 6.4e-33 144.1 107 71.0
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.9e-32 142.5 109 68.8
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 1.9e-32 142.5 107 70.1
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 2.4e-32 142.1 109 68.8
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 3.2e-32 141.7 109 67.9
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 7.1e-32 140.6 107 70.1
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 9.3e-32 140.2 107 66.4
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 4.6e-31 137.9 108 69.4
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 6.0e-31 137.5 107 66.4
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 7.8e-31 137.1 107 68.2
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.0e-30 136.7 108 69.4
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.3e-30 136.3 108 67.6
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 2.3e-30 135.6 107 69.2
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 3.0e-30 135.2 107 67.3
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.9e-30 134.8 107 68.2
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 3.9e-30 134.8 107 66.4
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 6.6e-30 134.0 109 64.2
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.3e-29 131.7 93 72.0
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 7.3e-29 130.6 107 63.6
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 7.3e-29 130.6 107 64.5
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 9.6e-29 130.2 107 64.5
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 9.6e-29 130.2 104 67.3
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.3e-28 129.8 107 66.4
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.3e-28 129.8 103 67.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 1.6e-28 129.4 109 65.1
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 2.1e-28 129.0 107 64.5
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 2.8e-28 128.6 107 63.6
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 2.8e-28 128.6 103 61.2
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 3.6e-28 128.3 107 63.6
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 3.6e-28 128.3 109 64.2
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 6.2e-28 127.5 109 64.2
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 6.2e-28 127.5 107 64.5
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 6.2e-28 127.5 104 68.3
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 6.2e-28 127.5 110 63.6
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 6.2e-28 127.5 107 63.6
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.1e-27 126.7 109 61.5
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.1e-27 126.7 109 61.5
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.1e-27 126.7 107 64.5
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.1e-27 126.7 107 64.5
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 1.1e-27 126.7 107 62.6
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 1.4e-27 126.3 107 62.6
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.4e-27 126.3 107 63.6
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.4e-27 126.3 109 65.1
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 1.8e-27 125.9 107 61.7
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 1.8e-27 125.9 107 61.7
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 1.8e-27 125.9 107 61.7
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 2.4e-27 125.6 107 61.7
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 3.1e-27 125.2 107 61.7
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 4.0e-27 124.8 107 59.8
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.0e-27 124.8 107 63.6
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 5.3e-27 124.4 107 62.6
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 1.2e-26 123.2 107 60.7
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.5e-26 122.9 107 62.6
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-26 122.9 67 85.1
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.6e-26 122.1 107 62.6
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 2.6e-26 122.1 104 62.5
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-26 121.7 67 83.6
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 4.5e-26 121.3 107 61.7
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 4.5e-26 121.3 107 61.7
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 7.6e-26 120.6 109 59.6
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 7.6e-26 120.6 107 60.7
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 7.6e-26 120.6 107 60.7
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 9.9e-26 120.2 107 59.8
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.3e-25 119.8 107 62.6
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.3e-25 119.8 107 63.6
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.7e-25 119.4 107 60.7
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.7e-25 119.4 107 60.7
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.7e-25 119.4 107 60.7
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.2e-25 119.0 109 61.5
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 2.2e-25 119.0 109 62.4
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 2.2e-25 119.0 109 61.5
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 2.2e-25 119.0 112 61.6
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 2.9e-25 118.6 107 60.7
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 2.9e-25 118.6 107 60.7
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 2.9e-25 118.6 110 60.0
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 2.9e-25 118.6 107 59.8
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 2.9e-25 118.6 107 58.9
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 4.9e-25 117.9 107 57.9
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 6.4e-25 117.5 107 59.8
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 6.4e-25 117.5 107 59.8
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 8.4e-25 117.1 107 60.7
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 8.4e-25 117.1 107 60.7
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.4e-24 116.3 107 59.8
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 1.9e-24 115.9 107 56.1
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.4e-24 115.5 107 63.6
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 2.4e-24 115.5 107 58.9
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 3.2e-24 115.2 108 61.1
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.2e-24 114.8 107 59.8
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 7.1e-24 114.0 110 58.2
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 7.1e-24 114.0 109 60.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 4.6e-23 111.3 110 57.3
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-22 109.8 107 56.1
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 3.0e-22 108.6 107 56.1
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 3.0e-22 108.6 110 57.3
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 3.9e-22 108.2 107 57.9
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 8.7e-22 107.1 70 72.9
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.5e-21 106.3 132 50.0
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 2.5e-21 105.5 107 54.2
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 1.3e-20 103.2 81 67.9
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 2.1e-20 102.4 89 62.9
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.8e-20 101.3 109 55.0
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 6.2e-20 100.9 111 49.5
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 3.4e-18 95.1 64 70.3
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 2.2e-17 92.4 56 67.9
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 1.4e-16 89.7 55 78.2
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.4e-16 89.7 52 75.0
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 5.5e-16 87.8 58 65.5
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 7.9e-15 84.0 104 43.3
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 1.3e-14 83.2 113 45.1
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 3.9e-14 81.6 99 42.4
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.5e-13 79.0 102 47.1
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 4.3e-13 78.2 65 55.4
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 9.6e-13 77.0 71 54.9
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.3e-12 76.6 71 53.5
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.5e-10 69.7 32 90.6
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 4.6e-07 58.2 71 49.3
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 1.0e-06 57.0 102 35.3


User provided reference genes

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