Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031890 Camellia sinensis var. sinensis HOM05D001825 ORTHO05D010533 1.2e-36 156.0 77 100.0
BolC9t56056H Brassica oleracea HOM05D001825 ORTHO05D010533 1.4e-13 79.3 54 70.4
VMungo1389G0002 Vigna mungo HOM05D001825 ORTHO05D002336 3.1e-13 78.2 38 97.4
BolC7t44006H Brassica oleracea HOM05D001825 ORTHO05D010533 5.3e-13 77.4 50 76.0
Lalb_Chr10g0099911 Lupinus albus HOM05D001825 ORTHO05D002336 6.9e-13 77.0 42 85.7
Ciclev10019417m.g Citrus clementina HOM05D001825 ORTHO05D002336 9.1e-13 76.6 38 94.7
Haze_17456 Corylus avellana HOM05D001825 ORTHO05D002336 1.5e-12 75.9 38 92.1
Ah.11g045010 Amaranthus hybridus HOM05D001825 ORTHO05D002336 2.0e-12 75.5 39 92.3
A08p27000 Brassica napus HOM05D001825 ORTHO05D002336 2.6e-12 75.1 38 94.7
BraA08t34646Z Brassica rapa HOM05D001825 ORTHO05D002336 2.6e-12 75.1 38 94.7
Dinv01484 Davidia involucrata HOM05D001825 ORTHO05D002336 4.5e-12 74.3 38 89.5
Cfa018613 Carpinus fangiana HOM05D001825 ORTHO05D002336 7.7e-12 73.6 38 92.1
Gohir.D08G106500 Gossypium hirsutum HOM05D001825 ORTHO05D002336 1.3e-11 72.8 36 94.4
A07p12640 Brassica napus HOM05D001825 ORTHO05D002336 1.7e-11 72.4 47 80.9
BraA07t29042Z Brassica rapa HOM05D001825 ORTHO05D002336 1.7e-11 72.4 47 80.9
Ciclev10022447m.g Citrus clementina HOM05D001825 ORTHO05D002336 1.7e-11 72.4 39 89.7
A09p39520 Brassica napus HOM05D001825 ORTHO05D004551 3.8e-11 71.2 47 80.9
BcaC06g35196 Brassica carinata HOM05D001825 ORTHO05D002336 5.0e-11 70.9 47 78.7
C07p18770 Brassica napus HOM05D001825 ORTHO05D002336 5.0e-11 70.9 47 78.7
BolC7t42385H Brassica oleracea HOM05D001825 ORTHO05D002336 5.0e-11 70.9 47 78.7
CBR_g26350 Chara braunii HOM05D001825 ORTHO05D002336 1.4e-10 69.3 38 84.2
FAN26G2317 Fragaria x ananassa HOM05D001825 ORTHO05D002336 9.4e-10 66.6 38 81.6
Cfa019793 Carpinus fangiana HOM05D001825 ORTHO05D002336 2.1e-09 65.5 33 93.9
Haze_18656 Corylus avellana HOM05D001825 ORTHO05D002336 2.1e-09 65.5 33 93.9
Nitab4.5_0003823g0090 Nicotiana tabacum HOM05D001825 ORTHO05D002336 2.1e-09 65.5 32 96.9
Nitab4.5_0004895g0070 Nicotiana tabacum HOM05D001825 ORTHO05D002336 2.1e-09 65.5 32 96.9
Peaxi162Scf00382g00122 Petunia axillaris HOM05D001825 ORTHO05D002336 2.1e-09 65.5 32 96.9
Solyc04g007100.4 Solanum lycopersicum HOM05D001825 ORTHO05D002336 2.1e-09 65.5 35 88.6
BcaC05g26446 Brassica carinata HOM05D001825 ORTHO05D010533 3.6e-09 64.7 40 77.5
Actinidia14869 Actinidia chinensis HOM05D001825 ORTHO05D002336 4.6e-09 64.3 32 93.8
BcaC04g21416 Brassica carinata HOM05D001825 ORTHO05D002336 4.6e-09 64.3 32 93.8
C09p32040 Brassica napus HOM05D001825 ORTHO05D010533 4.6e-09 64.3 32 93.8
SalBow8G3841 Salvia bowleyana HOM05D001825 ORTHO05D002336 4.6e-09 64.3 31 96.8
unitig_26.g10265 Utricularia gibba HOM05D001825 ORTHO05D002336 4.6e-09 64.3 31 96.8
Gorai.013G081300 Gossypium raimondii HOM05D001825 ORTHO05D002336 1.4e-08 62.8 33 90.9
arahy.Tifrunner.gnm1.ann1.I3PUBY Arachis hypogaea HOM05D001825 ORTHO05D002336 1.8e-08 62.4 33 90.9
SalBow8G4326 Salvia bowleyana HOM05D001825 ORTHO05D002336 2.3e-08 62.0 32 90.6
vmacro10543 Vaccinium macrocarpon HOM05D001825 ORTHO05D002336 2.3e-08 62.0 28 100.0
Actinidia39822 Actinidia chinensis HOM05D001825 ORTHO05D002336 3.0e-08 61.6 30 93.3
PGSC0003DMG402015876 Solanum tuberosum HOM05D001825 ORTHO05D002336 3.0e-08 61.6 32 87.5
Oeu010777.1 Olea europaea HOM05D001825 ORTHO05D002336 3.9e-08 61.2 29 96.6
SGA_v2.0_scaffold29G12344 Striga asiatica HOM05D021917 ORTHO05D030687 3.9e-08 61.2 51 60.8
QL10p025031 Quercus lobata HOM05D001825 ORTHO05D002336 5.1e-08 60.8 31 87.1
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 1.1e-07 59.7 28 96.4
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.1e-07 59.7 28 96.4
C07p34740 Brassica napus HOM05D001825 ORTHO05D002336 1.1e-07 59.7 28 96.4
C07p34760 Brassica napus HOM05D001825 ORTHO05D002336 1.1e-07 59.7 28 96.4
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.1e-07 59.7 28 96.4
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 1.1e-07 59.7 28 96.4
GSVIVG01036014001 Vitis vinifera HOM05D001825 ORTHO05D002336 1.5e-07 59.3 39 69.2
FAN01G0170 Fragaria x ananassa HOM05D001255 ORTHO05D017890 2.6e-07 58.5 32 84.4
Nitab4.5_0011561g0040 Nicotiana tabacum HOM05D001825 ORTHO05D002336 1.7e-06 55.8 31 83.9
Peaxi162Scf00013g00935 Petunia axillaris HOM05D001825 ORTHO05D002336 1.7e-06 55.8 31 83.9
BraA09t39448Z Brassica rapa HOM05D001825 ORTHO05D002336 2.8e-06 55.1 28 89.3
SGA_v2.0_scaffold298G47651 Striga asiatica HOM05D026199 ORTHO05D030687 6.3e-06 53.9 27 88.9


User provided reference genes

Program Settings