Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.2e-121 439.9 228 100.0
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.1e-101 372.1 233 86.3
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.2e-49 200.7 294 45.9
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.8e-48 194.9 326 41.1
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.3e-43 180.6 217 48.4
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.2e-32 142.1 245 42.4
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.1e-29 132.5 243 38.3
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.7e-28 129.8 218 38.5
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.6e-28 129.0 218 37.6
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.9e-27 126.3 189 41.3
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.3e-26 122.5 187 41.2
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 7.3e-26 121.7 212 41.0
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-24 117.5 117 53.8
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 4.9e-14 82.4 168 33.9
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 4.9e-14 82.4 168 33.9
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.1e-13 81.3 187 28.9
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 7.1e-13 78.6 143 31.5
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 1.6e-12 77.4 171 33.3
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.6e-12 75.9 171 29.8
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 1.0e-11 74.7 167 29.9
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 1.0e-11 74.7 198 26.8
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.3e-11 73.6 143 28.7
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 3.0e-11 73.2 153 35.9
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.9e-11 72.8 175 28.0
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 3.9e-11 72.8 155 28.4
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 6.6e-11 72.0 138 33.3
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 8.6e-11 71.6 157 31.8
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 8.6e-11 71.6 168 30.4
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.5e-10 70.9 219 28.3
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 7.3e-10 68.6 154 33.8
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 4.7e-09 65.9 175 29.1
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 8.1e-09 65.1 185 26.5
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.1e-08 64.7 167 30.5
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 1.8e-08 63.9 103 33.0
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 4.4e-07 59.3 179 28.5
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 5.8e-07 58.9 153 30.1
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 5.8e-07 58.9 181 28.2
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 1.3e-06 57.8 143 26.6
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 2.2e-06 57.0 166 29.5


User provided reference genes

Program Settings