Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031831 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D019487 7.8e-41 169.9 76 100.0
TAR628G1296 Trochodendron aralioides HOM05D003525 ORTHO05D004578 1.7e-08 62.4 35 77.1
Actinidia00521 Actinidia chinensis HOM05D003525 ORTHO05D004578 3.0e-08 61.6 35 77.1
Cfa005008 Carpinus fangiana HOM05D003525 ORTHO05D004578 3.0e-08 61.6 35 80.0
Haze_02380 Corylus avellana HOM05D003525 ORTHO05D004578 3.0e-08 61.6 35 80.0
Actinidia08229 Actinidia chinensis HOM05D003525 ORTHO05D019487 3.9e-08 61.2 29 89.7
Actinidia17817 Actinidia chinensis HOM05D003525 ORTHO05D004578 3.9e-08 61.2 29 89.7
Lj9A369G67 Lonicera japonica HOM05D003525 ORTHO05D004578 3.9e-08 61.2 35 77.1
SalBow6G0296 Salvia bowleyana HOM05D003525 ORTHO05D004578 3.9e-08 61.2 35 80.0
SalBow6G6569 Salvia bowleyana HOM05D003525 ORTHO05D004578 3.9e-08 61.2 35 80.0
CiPaw.05G064000 Carya illinoinensis HOM05D003525 ORTHO05D004578 5.1e-08 60.8 29 89.7
DCAR_022933 Daucus carota HOM05D003525 ORTHO05D004578 8.7e-08 60.1 35 77.1
TWI79G1197 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 8.7e-08 60.1 35 74.3
CANSAT01G0222 Cannabis sativa HOM05D003525 ORTHO05D004578 1.1e-07 59.7 35 71.4
Dinv42068 Davidia involucrata HOM05D003525 ORTHO05D004578 1.1e-07 59.7 29 86.2
GSVIVG01031961001 Vitis vinifera HOM05D003525 ORTHO05D004578 1.1e-07 59.7 35 77.1
EL10Ac9g21728 Beta vulgaris HOM05D003525 ORTHO05D004578 1.5e-07 59.3 35 74.3
Dinv23526 Davidia involucrata HOM05D003525 ORTHO05D004578 1.5e-07 59.3 28 85.7
FAN27G1229 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.5e-07 59.3 34 76.5
Nitab4.5_0000308g0040 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.5e-07 59.3 29 86.2
Nitab4.5_0004172g0090 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.5e-07 59.3 29 86.2
Nitab4.5_0005152g0050 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.5e-07 59.3 29 89.7
Peaxi162Scf00016g00826 Petunia axillaris HOM05D003525 ORTHO05D004578 1.5e-07 59.3 29 86.2
Rhsim05G0074500 Rhododendron simsii HOM05D003525 ORTHO05D004578 1.9e-07 58.9 29 86.2
TWI31G1364 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 2.5e-07 58.5 35 71.4
Atru.chr5.3008 Acer truncatum HOM05D003525 ORTHO05D004578 3.3e-07 58.2 35 74.3
CiPaw.06G135700 Carya illinoinensis HOM05D003525 ORTHO05D004578 3.3e-07 58.2 35 74.3
Ciclev10028340m.g Citrus clementina HOM05D003525 ORTHO05D004578 3.3e-07 58.2 28 85.7
Cc02_g17610 Coffea canephora HOM05D003525 ORTHO05D004578 3.3e-07 58.2 29 82.8
Oeu020764.1 Olea europaea HOM05D003525 ORTHO05D004578 3.3e-07 58.2 28 82.1
QL11p043469 Quercus lobata HOM05D003525 ORTHO05D004578 3.3e-07 58.2 34 70.6
Actinidia27898 Actinidia chinensis HOM05D003525 ORTHO05D004578 4.3e-07 57.8 29 82.8
Nitab4.5_0001361g0240 Nicotiana tabacum HOM05D003525 ORTHO05D004578 5.6e-07 57.4 29 86.2
Sabra04G0102300 Salix brachista HOM05D003525 ORTHO05D004578 5.6e-07 57.4 28 85.7
Hund06230 Selenicereus undatus HOM05D003525 ORTHO05D004578 5.6e-07 57.4 35 71.4
PGSC0003DMG400033911 Solanum tuberosum HOM05D003525 ORTHO05D004578 5.6e-07 57.4 29 86.2
CAN.G1412.2 Capsicum annuum HOM05D003525 ORTHO05D004578 7.3e-07 57.0 29 82.8
Migut.B00240 Erythranthe guttata HOM05D003525 ORTHO05D004578 7.3e-07 57.0 35 71.4
Solyc10g051340.2 Solanum lycopersicum HOM05D003525 ORTHO05D004578 7.3e-07 57.0 29 86.2
Sopen10g023030 Solanum pennellii HOM05D003525 ORTHO05D004578 7.3e-07 57.0 29 86.2
Migut.N01237 Erythranthe guttata HOM05D003525 ORTHO05D004578 9.6e-07 56.6 35 74.3
HanXRQChr13g0410301 Helianthus annuus HOM05D003525 ORTHO05D004578 9.6e-07 56.6 28 85.7
Thecc.02G086000 Theobroma cacao HOM05D003525 ORTHO05D004578 9.6e-07 56.6 29 82.8
unitig_22.g5174 Utricularia gibba HOM05D003525 ORTHO05D004578 9.6e-07 56.6 35 74.3
vmacro17495 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 9.6e-07 56.6 29 82.8
FvH4_2g08710 Fragaria vesca HOM05D003525 ORTHO05D004578 1.2e-06 56.2 34 73.5
FAN24G2203 Fragaria x ananassa HOM05D003525 ORTHO05D004578 1.2e-06 56.2 34 73.5
RcHm_v2.0_Chr6g0264151 Rosa chinensis HOM05D003525 ORTHO05D004578 1.2e-06 56.2 34 73.5
AUR62016732 Chenopodium quinoa HOM05D003525 ORTHO05D004578 2.1e-06 55.5 28 78.6
Eucgr.I01265 Eucalyptus grandis HOM05D003525 ORTHO05D004578 2.1e-06 55.5 28 82.1
FAN15G1113 Fragaria x ananassa HOM05D003525 ORTHO05D004578 2.1e-06 55.5 28 82.1
MBI16_g36558_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 2.1e-06 55.5 35 68.6
MBI16_g38644_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 2.1e-06 55.5 35 68.6
Sabra09G0088700 Salix brachista HOM05D003525 ORTHO05D004578 2.1e-06 55.5 28 85.7
ClCG11G004450 Citrullus lanatus HOM05D003525 ORTHO05D004578 2.8e-06 55.1 28 82.1
FAN20G1110 Fragaria x ananassa HOM05D003525 ORTHO05D004578 2.8e-06 55.1 34 73.5
Lj5A197T61 Lonicera japonica HOM05D003525 ORTHO05D004578 2.8e-06 55.1 35 68.6
MSTRG.20085 Avicennia marina HOM05D003525 ORTHO05D004578 3.6e-06 54.7 29 79.3
Duzib052G0238 Durio zibethinus HOM05D003525 ORTHO05D004578 3.6e-06 54.7 35 68.6
PGR142G1190 Punica granatum HOM05D003525 ORTHO05D004578 3.6e-06 54.7 28 75.0
VMungo1127G1959 Vigna mungo HOM05D003525 ORTHO05D004578 3.6e-06 54.7 28 78.6
CAN.G1.44 Capsicum annuum HOM05D003525 ORTHO05D004578 4.7e-06 54.3 29 82.8
ClCG02G005050 Citrullus lanatus HOM05D003525 ORTHO05D004578 4.7e-06 54.3 28 82.1
CsaV3_2G014670 Cucumis sativus L. HOM05D003525 ORTHO05D004578 4.7e-06 54.3 28 82.1
ECA234G0118 Erigeron canadensis HOM05D003525 ORTHO05D004578 4.7e-06 54.3 28 82.1
Sc18g0004490 Simmondsia chinensis HOM05D003525 ORTHO05D004578 4.7e-06 54.3 35 68.6
MELO3C020978.2 Cucumis melo HOM05D003525 ORTHO05D004578 6.2e-06 53.9 28 78.6
Duzib132G0954 Durio zibethinus HOM05D003525 ORTHO05D004578 6.2e-06 53.9 33 69.7
Potri.004G153900 Populus trichocarpa HOM05D003525 ORTHO05D004578 6.2e-06 53.9 28 82.1
Potri.009G115500 Populus trichocarpa HOM05D003525 ORTHO05D004578 6.2e-06 53.9 28 82.1
Solyc01g109580.4 Solanum lycopersicum HOM05D003525 ORTHO05D004578 6.2e-06 53.9 29 79.3
Sopen01g051770 Solanum pennellii HOM05D003525 ORTHO05D004578 6.2e-06 53.9 29 79.3
ATR0733G133 Amborella trichopoda HOM05D003525 ORTHO05D004578 8.1e-06 53.5 28 78.6
Gohir.A13G034600 Gossypium hirsutum HOM05D003525 ORTHO05D004578 8.1e-06 53.5 35 68.6
Gohir.D13G033000 Gossypium hirsutum HOM05D003525 ORTHO05D004578 8.1e-06 53.5 35 68.6
PSO210G1867 Papaver somniferum HOM05D003525 ORTHO05D004578 8.1e-06 53.5 28 78.6
PSO675G1462 Papaver somniferum HOM05D003525 ORTHO05D004578 8.1e-06 53.5 28 78.6
PSO731G0006 Papaver somniferum HOM05D003525 ORTHO05D004578 8.1e-06 53.5 28 78.6
Peaxi162Scf00003g01338 Petunia axillaris HOM05D003525 ORTHO05D004578 8.1e-06 53.5 27 81.5
Sed0023087 Sechium edule HOM05D003525 ORTHO05D004578 8.1e-06 53.5 28 78.6
TAR376G0071 Trochodendron aralioides HOM05D003525 ORTHO05D004578 8.1e-06 53.5 25 80.0


User provided reference genes

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