Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 6.5e-88 327.4 171 100.0
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.1e-55 220.3 165 71.5
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.1e-54 216.1 167 69.5
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.4e-53 213.4 167 68.9
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 6.4e-51 204.5 165 67.9
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 8.6e-48 194.1 147 70.7
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 2.1e-46 189.5 151 66.9
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 2.4e-45 186.0 151 65.6
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.2e-43 179.5 154 63.6
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 7.1e-42 174.5 150 60.7
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 1.3e-40 170.2 168 56.0
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.7e-40 169.9 151 57.6
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 3.9e-40 168.7 145 60.0
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 8.7e-40 167.5 165 55.8
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 2.5e-39 166.0 151 56.3
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 3.3e-39 165.6 150 58.7
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 4.3e-39 165.2 166 51.8
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 5.6e-39 164.9 149 60.4
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 5.6e-39 164.9 150 56.7
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 1.3e-38 163.7 157 54.1
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 1.3e-38 163.7 157 54.1
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 2.1e-38 162.9 148 56.1
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 2.8e-38 162.5 165 55.2
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 3.6e-38 162.2 151 59.6
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 4.8e-38 161.8 158 57.0
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 4.8e-38 161.8 150 56.0
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 6.2e-38 161.4 145 57.2
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 1.1e-37 160.6 150 57.3
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 1.4e-37 160.2 149 57.0
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.4e-37 160.2 147 57.8
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 1.8e-37 159.8 149 56.4
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-37 159.8 145 57.2
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 2.4e-37 159.5 160 53.8
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 2.4e-37 159.5 164 51.8
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 3.1e-37 159.1 163 52.8
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 3.1e-37 159.1 158 53.8
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 3.1e-37 159.1 157 54.1
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 5.3e-37 158.3 158 53.8
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.3e-37 158.3 147 57.1
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 5.3e-37 158.3 164 52.4
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 9.0e-37 157.5 164 51.8
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 4.4e-36 155.2 124 64.5
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 7.6e-36 154.5 157 52.9
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 7.6e-36 154.5 143 55.2
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 1.3e-35 153.7 139 61.2
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.2e-35 152.9 143 58.0
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 2.9e-35 152.5 139 60.4
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 6.4e-35 151.4 158 51.9
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 8.4e-35 151.0 127 60.6
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 1.1e-34 150.6 164 51.2
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 1.9e-34 149.8 143 52.4
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 1.9e-34 149.8 143 53.8
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 3.2e-34 149.1 143 53.1
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 4.2e-34 148.7 250 38.0
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 4.2e-34 148.7 143 57.3
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 5.4e-34 148.3 164 50.6
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 7.1e-34 147.9 151 53.0
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 2.1e-33 146.4 143 52.4
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 2.1e-33 146.4 151 51.7
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 2.1e-33 146.4 151 51.0
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 2.1e-33 146.4 151 51.0
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 2.1e-33 146.4 143 55.9
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 3.5e-33 145.6 148 55.4
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 6.0e-33 144.8 142 51.4
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 1.0e-32 144.1 143 51.7
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 3.0e-32 142.5 194 44.8
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 6.6e-32 141.4 167 50.9
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 2.5e-31 139.4 142 52.1
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 2.5e-31 139.4 127 57.5
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 3.3e-31 139.0 142 52.1
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 2.1e-30 136.3 201 43.3
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 6.2e-30 134.8 158 46.8
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.2e-28 130.6 78 84.6
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 1.5e-28 130.2 121 57.9
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 7.6e-28 127.9 144 48.6
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 9.9e-28 127.5 163 44.8
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 1.3e-27 127.1 143 49.7
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 2.2e-27 126.3 165 47.9
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 3.8e-27 125.6 116 55.2
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 1.6e-25 120.2 149 47.7
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 3.5e-25 119.0 142 47.2
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.8e-24 116.7 129 48.1
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.1e-23 114.0 190 38.4
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 2.8e-22 109.4 134 50.0
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.8e-21 106.7 165 42.4
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.5e-20 103.6 165 41.8
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 3.8e-19 99.0 155 41.9
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 4.9e-19 98.6 117 48.7
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 1.4e-18 97.1 158 41.1
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 2.7e-17 92.8 97 55.7
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 2.0e-12 76.6 67 59.7
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 1.7e-11 73.6 66 50.0
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 1.9e-10 70.1 61 52.5
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 7.1e-10 68.2 162 28.4
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 7.4e-07 58.2 157 28.7


User provided reference genes

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