Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 9.3e-170 600.1 304 100.0
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 6.8e-96 354.8 353 62.9
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 5.6e-90 335.1 329 62.0
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.1e-85 320.9 353 60.1
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 9.9e-79 297.7 359 54.0
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 4.3e-34 149.4 136 62.5
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.9e-30 136.7 306 36.3
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 5.5e-29 132.5 136 56.6
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 7.9e-28 128.6 135 55.6
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-26 122.5 195 46.2
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.5e-23 114.4 196 44.9
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.7e-11 72.4 159 41.5
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-10 69.3 131 40.5
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 5.7e-10 69.3 131 40.5
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-09 67.8 229 32.3
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 8.2e-09 65.5 124 41.1
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 2.0e-07 60.8 121 40.5
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 1.3e-06 58.2 127 37.8
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 57.0 194 33.0
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 5.0e-06 56.2 154 37.0
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 6.5e-06 55.8 119 35.3


User provided reference genes

Program Settings