Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031745 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 1.5e-44 182.6 96 100.0
CSS0045402 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 8.0e-43 176.8 96 97.9
CSS0038484 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 8.9e-42 173.3 96 94.8
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.3e-29 132.9 108 72.2
CSS0017240 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 6.6e-29 130.6 96 76.0
CSS0002641 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 1.9e-28 129.0 96 75.0
CSS0010685 Camellia sinensis var. sinensis HOM05D020260 ORTHO05D022112 3.6e-27 124.8 96 74.0
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 3.6e-19 98.2 117 51.3
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 3.0e-13 78.6 113 48.7
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 2.1e-11 72.4 61 68.9
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 8.1e-11 70.5 112 46.4
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 7.6e-09 63.9 110 39.1
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 2.2e-08 62.4 111 40.5
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 6.4e-08 60.8 111 39.6
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 1.4e-07 59.7 118 39.0
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 2.4e-07 58.9 117 41.0
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 9.3e-07 57.0 112 38.4
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 1.6e-06 56.2 118 36.4
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 2.1e-06 55.8 82 45.1
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 7.8e-06 53.9 112 37.5


User provided reference genes

Program Settings