Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 6.7e-64 247.3 134 100.0
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.0e-52 209.1 134 85.1
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.0e-52 209.1 134 83.6
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 2.4e-45 185.7 133 78.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 4.4e-39 164.9 137 70.8
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 2.2e-38 162.5 129 75.2
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.7e-38 161.8 135 64.4
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 4.9e-38 161.4 129 72.1
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 5.4e-37 157.9 132 67.4
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 5.4e-37 157.9 124 69.4
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 9.2e-37 157.1 134 68.7
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.7e-36 155.6 135 63.7
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.9e-36 154.5 134 64.2
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 7.8e-36 154.1 134 64.9
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 7.8e-36 154.1 134 64.9
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.0e-35 153.7 118 71.2
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 2.3e-35 152.5 136 64.7
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 6.6e-35 151.0 130 63.1
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.6e-35 150.6 130 60.8
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.6e-35 150.6 134 62.7
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 8.6e-35 150.6 134 63.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.1e-34 150.2 135 65.2
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.5e-34 149.8 130 65.4
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.5e-34 149.8 135 63.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.9e-34 149.4 134 61.9
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.9e-34 149.4 132 60.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 3.3e-34 148.7 133 60.9
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.3e-34 147.5 126 66.7
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.2e-33 146.7 135 64.4
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.1e-33 146.0 137 64.2
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.1e-33 146.0 137 64.2
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 2.1e-33 146.0 132 61.4
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.1e-33 146.0 133 60.2
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.4e-32 143.3 108 67.6
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.3e-32 142.5 128 60.9
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.1e-32 142.1 119 68.9
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 3.1e-32 142.1 134 60.4
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 5.2e-32 141.4 101 70.3
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 8.9e-32 140.6 135 60.7
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 8.9e-32 140.6 134 60.4
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 8.9e-32 140.6 123 62.6
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 8.9e-32 140.6 130 60.8
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-31 139.4 126 64.3
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.8e-31 137.9 137 60.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 7.5e-31 137.5 126 63.5
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 9.8e-31 137.1 126 63.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 9.8e-31 137.1 131 61.8
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 9.8e-31 137.1 134 58.2
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.7e-30 136.3 133 59.4
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.9e-30 134.8 126 62.7
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 4.9e-30 134.8 123 60.2
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 6.4e-30 134.4 127 63.0
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 6.4e-30 134.4 134 57.5
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 6.4e-30 134.4 131 59.5
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 6.4e-30 134.4 135 59.3
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 8.3e-30 134.0 131 59.5
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.3e-30 134.0 141 58.9
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 8.3e-30 134.0 131 57.3
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-29 133.3 128 57.8
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.4e-29 133.3 135 55.6
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.9e-29 132.9 134 56.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 3.2e-29 132.1 133 56.4
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 3.2e-29 132.1 133 56.4
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 3.2e-29 132.1 133 56.4
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 3.2e-29 132.1 133 57.1
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 4.1e-29 131.7 128 57.0
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 4.1e-29 131.7 128 58.6
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.4e-29 131.3 134 60.4
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 7.0e-29 131.0 128 57.0
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 7.0e-29 131.0 128 57.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 7.0e-29 131.0 133 56.4
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 9.2e-29 130.6 133 56.4
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 9.2e-29 130.6 133 56.4
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.2e-28 130.2 132 56.8
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 1.6e-28 129.8 129 57.4
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 2.0e-28 129.4 129 56.6
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.0e-28 129.4 135 58.5
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.7e-28 129.0 101 65.3
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 3.5e-28 128.6 89 84.3
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.5e-28 128.6 141 56.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 6.0e-28 127.9 135 54.1
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 7.8e-28 127.5 113 61.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.7e-27 126.3 119 60.5
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.7e-27 126.3 111 62.2
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 3.0e-27 125.6 131 58.0
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 3.9e-27 125.2 128 55.5
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 3.9e-27 125.2 128 55.5
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 3.9e-27 125.2 109 63.3
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 6.6e-27 124.4 129 54.3
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.5e-26 123.2 129 54.3
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.9e-26 122.9 102 67.6
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.5e-26 122.5 106 62.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 3.3e-26 122.1 130 54.6
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 4.3e-26 121.7 131 55.0
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 9.5e-26 120.6 134 53.7
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.2e-25 120.2 125 57.6
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.1e-25 119.4 102 59.8
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.8e-25 119.0 129 56.6
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.4e-24 116.7 131 55.7
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.4e-24 116.7 123 55.3
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.4e-24 116.7 129 52.7
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.8e-24 116.3 135 55.6
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-24 116.3 123 57.7
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.2e-23 113.6 129 52.7
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.4e-23 111.7 101 58.4
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.4e-23 111.7 124 54.8
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 7.5e-23 110.9 129 51.9
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 7.5e-23 110.9 131 51.1
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.6e-20 103.2 128 50.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.7e-20 102.4 73 69.9
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.7e-20 102.4 102 59.8
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.7e-19 99.8 99 55.6
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 8.6e-19 97.4 129 45.7
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.2e-17 93.6 100 52.0
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.6e-17 92.0 110 51.8
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 5.2e-16 88.2 70 65.7
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.5e-15 86.7 120 46.7
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 7.6e-15 84.3 70 65.7
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 6.4e-14 81.3 88 48.9
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.4e-13 79.3 85 49.4
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.2e-13 79.0 85 57.6
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 4.1e-13 78.6 114 43.9
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.1e-09 66.2 92 35.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 4.0e-08 62.0 104 35.6
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.3e-06 57.0 135 34.1
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.2e-06 56.2 41 58.5
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.2e-06 56.2 41 58.5


User provided reference genes

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