Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 6.0e-43 177.2 94 100.0
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 8.7e-42 173.3 94 97.9
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.5e-30 136.0 95 82.1
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 7.1e-28 127.1 94 77.7
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 1.0e-26 123.2 93 73.1
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 1.8e-26 122.5 95 73.7
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.8e-23 112.5 92 64.1
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 1.2e-22 109.8 76 78.9
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 2.6e-22 108.6 91 63.7
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 5.8e-22 107.5 90 64.4
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 7.6e-22 107.1 93 65.6
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 1.0e-21 106.7 91 61.5
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 2.2e-21 105.5 90 63.3
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 2.9e-21 105.1 82 69.5
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 8.4e-21 103.6 81 66.7
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 1.1e-20 103.2 81 69.1
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 1.1e-20 103.2 92 63.0
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 5.5e-20 100.9 92 60.9
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 5.5e-20 100.9 91 60.4
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 1.2e-19 99.8 91 64.8
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 1.6e-19 99.4 94 63.8
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.6e-19 99.4 81 66.7
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 1.6e-19 99.4 93 60.2
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 3.5e-19 98.2 94 61.7
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 6.0e-19 97.4 80 68.8
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 6.0e-19 97.4 85 64.7
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 7.9e-19 97.1 93 60.2
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 1.3e-18 96.3 85 63.5
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.3e-18 96.3 85 63.5
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.3e-18 96.3 85 63.5
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 1.3e-18 96.3 92 58.7
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 1.8e-18 95.9 93 60.2
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 2.3e-18 95.5 82 63.4
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 2.3e-18 95.5 92 62.0
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 3.0e-18 95.1 83 63.9
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 3.9e-18 94.7 81 63.0
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 3.9e-18 94.7 92 57.6
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 5.1e-18 94.4 93 63.4
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 8.7e-18 93.6 93 58.1
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.5e-17 92.8 86 61.6
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 1.9e-17 92.4 93 57.0
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 2.5e-17 92.0 93 59.1
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 2.5e-17 92.0 93 57.0
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 3.3e-17 91.7 94 59.6
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 3.3e-17 91.7 94 58.5
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 4.3e-17 91.3 93 55.9
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 7.4e-17 90.5 85 61.2
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 7.4e-17 90.5 93 59.1
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.3e-16 89.7 82 59.8
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 2.8e-16 88.6 80 63.8
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.8e-16 88.6 83 63.9
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 2.8e-16 88.6 83 63.9
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 2.8e-16 88.6 90 55.6
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 4.8e-16 87.8 82 58.5
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 6.3e-16 87.4 94 55.3
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 8.2e-16 87.0 82 64.6
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 1.1e-15 86.7 83 61.4
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 1.1e-15 86.7 93 55.9
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 1.4e-15 86.3 79 60.8
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.4e-15 86.3 83 60.2
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.8e-15 85.9 93 57.0
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 1.8e-15 85.9 91 54.9
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 1.8e-15 85.9 94 55.3
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 3.1e-15 85.1 93 54.8
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 5.3e-15 84.3 83 60.2
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 5.3e-15 84.3 93 53.8
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 2.0e-14 82.4 77 61.0
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 2.0e-14 82.4 81 51.9
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 4.5e-14 81.3 96 52.1
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 7.7e-14 80.5 76 63.2
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 1.7e-13 79.3 93 51.6
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 5.0e-13 77.8 78 64.1
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 6.5e-13 77.4 79 58.2
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.1e-12 76.6 82 53.7
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 1.9e-12 75.9 79 59.5
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 1.9e-12 75.9 93 48.4
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 9.4e-12 73.6 70 58.6
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 9.4e-12 73.6 59 64.4
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 2.7e-11 72.0 94 47.9
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 7.9e-11 70.5 80 57.5
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 1.4e-10 69.7 85 50.6
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 1.4e-10 69.7 80 45.0
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 1.8e-10 69.3 93 45.2
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 3.0e-10 68.6 74 55.4
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 3.0e-10 68.6 79 51.9
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 8.8e-10 67.0 79 50.6
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 1.5e-09 66.2 79 50.6
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 1.5e-09 66.2 89 49.4
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 2.5e-09 65.5 55 63.6
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 5.7e-09 64.3 64 59.4
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 9.7e-09 63.5 49 69.4
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 4.8e-08 61.2 80 47.5
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-08 61.2 61 50.8
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 4.1e-07 58.2 83 48.2
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.2e-06 56.6 70 44.3
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 2.6e-06 55.5 65 55.4
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 7.7e-06 53.9 82 47.6


User provided reference genes

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