Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.5e-74 282.0 133 100.0
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.3e-72 276.2 133 97.7
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 1.0e-64 250.0 133 86.5
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.3e-63 245.0 129 85.3
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 3.3e-63 245.0 130 86.2
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.6e-62 242.7 133 83.5
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 1.6e-62 242.7 130 84.6
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.6e-62 242.7 130 84.6
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 3.7e-62 241.5 130 81.5
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 6.3e-62 240.7 133 83.5
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 8.2e-62 240.4 133 82.7
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 8.2e-62 240.4 133 82.0
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 8.2e-62 240.4 133 82.7
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.4e-61 239.6 130 83.1
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.4e-61 239.6 130 83.1
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.4e-61 239.6 130 83.1
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 2.4e-61 238.8 130 81.5
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.1e-61 238.4 130 82.3
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 3.1e-61 238.4 133 81.2
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.3e-61 237.7 133 79.7
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.3e-61 237.7 133 79.7
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 5.3e-61 237.7 130 82.3
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 1.2e-60 236.5 133 81.2
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 2.0e-60 235.7 133 81.2
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.6e-60 235.3 129 82.2
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.6e-60 235.3 133 80.5
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 5.9e-60 234.2 130 80.8
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 1.0e-59 233.4 130 80.0
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 1.0e-59 233.4 131 78.6
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 1.3e-59 233.0 130 80.8
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 1.3e-59 233.0 133 80.5
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 1.7e-59 232.6 130 79.2
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.2e-59 232.3 133 77.4
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 2.2e-59 232.3 133 78.9
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 2.9e-59 231.9 135 77.0
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 2.9e-59 231.9 130 80.8
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 3.8e-59 231.5 130 80.0
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.8e-59 231.5 129 79.8
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 3.8e-59 231.5 133 77.4
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 3.8e-59 231.5 130 80.8
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 6.5e-59 230.7 129 80.6
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 1.1e-58 229.9 129 79.1
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 1.9e-58 229.2 133 78.2
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 3.2e-58 228.4 129 78.3
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 3.2e-58 228.4 129 76.7
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 5.5e-58 227.6 130 80.0
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 7.2e-58 227.3 129 79.8
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 9.4e-58 226.9 130 76.9
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.2e-57 226.5 133 78.2
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.1e-57 225.7 135 76.3
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 2.1e-57 225.7 135 76.3
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.1e-57 225.7 133 76.7
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 6.1e-57 224.2 130 77.7
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 7.9e-57 223.8 130 76.9
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 7.9e-57 223.8 135 74.8
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 7.9e-57 223.8 131 77.1
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.0e-56 223.4 133 77.4
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.0e-56 223.4 175 63.4
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 1.4e-56 223.0 133 78.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 1.4e-56 223.0 134 75.4
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 1.4e-56 223.0 130 76.2
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 1.8e-56 222.6 133 77.4
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.8e-56 222.6 133 75.2
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 3.9e-56 221.5 133 75.9
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 8.8e-56 220.3 129 76.7
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.5e-55 219.5 130 76.2
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 2.0e-55 219.2 132 78.8
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 3.3e-55 218.4 127 76.4
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 5.7e-55 217.6 133 74.4
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 9.7e-55 216.9 130 73.8
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 1.7e-54 216.1 137 74.5
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 3.7e-54 214.9 130 74.6
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 3.7e-54 214.9 130 76.2
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.8e-53 212.6 131 72.5
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 9.1e-53 210.3 129 74.4
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 9.1e-53 210.3 130 70.8
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 9.1e-53 210.3 129 72.9
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 5.0e-51 204.5 130 70.8
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 2.1e-49 199.1 130 69.2
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.4e-48 196.4 128 68.0
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 2.3e-48 195.7 110 81.8
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 2.3e-48 195.7 130 68.5
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 3.0e-48 195.3 130 67.7
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.1e-47 193.4 131 67.9
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 5.7e-47 191.0 131 67.2
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 3.7e-46 188.3 131 65.6
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.8e-46 188.0 129 65.1
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 4.8e-46 188.0 227 45.8
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 6.3e-46 187.6 129 64.3
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 6.3e-46 187.6 131 66.4
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 2.4e-45 185.7 131 64.9
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 2.4e-45 185.7 131 64.9
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 2.4e-45 185.7 131 64.9
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 3.1e-45 185.3 131 64.1
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 3.1e-45 185.3 131 64.1
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 1.5e-44 183.0 126 65.9
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 2.0e-44 182.6 131 63.4
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 2.6e-44 182.2 131 64.9
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 7.7e-44 180.6 133 64.7
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 7.2e-42 174.1 129 58.9
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 4.7e-41 171.4 153 56.9
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 8.0e-41 170.6 129 56.6
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.0e-40 170.2 132 58.3
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 3.9e-40 168.3 131 62.6
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 7.0e-37 157.5 133 57.9
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.0e-36 156.0 85 82.4
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 3.5e-36 155.2 129 57.4
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 4.5e-36 154.8 135 54.1
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 1.3e-35 153.3 85 81.2
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.7e-35 152.9 130 53.8
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 9.4e-34 147.1 129 52.7
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 5.2e-32 141.4 102 59.8
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 1.2e-31 140.2 129 51.2
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 5.7e-31 137.9 79 77.2
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 5.0e-27 124.8 75 73.3
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 3.6e-25 118.6 120 50.8
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 3.6e-25 118.6 64 79.7
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 7.5e-23 110.9 72 75.0
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.4e-21 106.7 124 44.4
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 4.7e-17 91.7 55 65.5
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.8e-13 79.7 48 72.9
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 3.2e-13 79.0 48 72.9
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.0e-11 73.9 54 59.3
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 6.6e-11 71.2 115 36.5
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.6e-09 66.6 43 67.4
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 6.1e-09 64.7 48 58.3


User provided reference genes

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