Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031678 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.6e-77 292.0 146 100.0
CSS0028153 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 3.9e-41 171.8 115 80.0
CSS0008959 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 7.9e-34 147.5 95 80.0
CSS0039006 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.8e-30 136.3 128 60.2
CSS0044420 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.5e-29 133.3 191 47.1
CSS0000641 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 1.4e-27 126.7 204 43.6
CSS0006016 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 2.7e-26 122.5 204 43.1
Actinidia23543 Actinidia chinensis HOM05D000311 ORTHO05D000183 4.5e-21 105.1 120 53.3
Actinidia02870 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.0e-17 94.0 120 50.0
Actinidia26343 Actinidia chinensis HOM05D000311 ORTHO05D000183 3.9e-17 92.0 117 50.4
Actinidia23544 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.1e-16 90.5 117 50.4
Dinv42933 Davidia involucrata HOM05D000311 ORTHO05D000183 7.0e-14 81.3 146 39.7
Dinv43167 Davidia involucrata HOM05D000311 ORTHO05D000183 7.0e-14 81.3 146 39.7
Nitab4.5_0009518g0030 Nicotiana tabacum HOM05D000311 ORTHO05D000183 2.6e-13 79.3 147 34.7
Actinidia37307 Actinidia chinensis HOM05D000311 ORTHO05D000183 3.8e-12 75.5 118 39.0
CiPaw.15G115400 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.1e-11 73.9 145 38.6
Actinidia23545 Actinidia chinensis HOM05D000311 ORTHO05D000183 1.9e-11 73.2 116 43.1
CiPaw.15G114400 Carya illinoinensis HOM05D000311 ORTHO05D000183 3.2e-11 72.4 118 43.2
Potri.003G013700 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.2e-11 72.4 129 37.2
CiPaw.15G114500 Carya illinoinensis HOM05D000311 ORTHO05D000183 4.2e-11 72.0 70 57.1
Dinv41536 Davidia involucrata HOM05D000311 ORTHO05D000183 4.7e-10 68.6 147 32.7
CSS0030458 Camellia sinensis var. sinensis HOM05D000311 ORTHO05D000183 8.0e-10 67.8 210 29.5
CiPaw.04G177700 Carya illinoinensis HOM05D000311 ORTHO05D000183 1.0e-09 67.4 111 41.4
Solyc11g011180.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 1.0e-09 67.4 129 35.7
Dinv36446 Davidia involucrata HOM05D000311 ORTHO05D000183 1.4e-09 67.0 135 36.3
Gohir.D02G027100 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.4e-09 67.0 144 31.2
Sopen11g005940 Solanum pennellii HOM05D000311 ORTHO05D000183 1.4e-09 67.0 129 34.9
TWI34G1776 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 2.3e-09 66.2 124 39.5
vmacro21891 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 4.0e-09 65.5 127 33.9
CiPaw.15G115300 Carya illinoinensis HOM05D000311 ORTHO05D000183 6.7e-09 64.7 94 46.8
TWI14G0299 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 6.7e-09 64.7 102 43.1
TWI14G0374 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 6.7e-09 64.7 102 43.1
QL04p004476 Quercus lobata HOM05D000311 ORTHO05D000183 8.8e-09 64.3 73 49.3
Oeu052518.2 Olea europaea HOM05D000311 ORTHO05D000183 1.2e-08 63.9 119 37.0
Duzib212G1037 Durio zibethinus HOM05D000311 ORTHO05D000183 2.0e-08 63.2 144 33.3
Actinidia13166 Actinidia chinensis HOM05D000311 ORTHO05D000183 3.3e-08 62.4 122 36.9
CAN.G222.21 Capsicum annuum HOM05D000311 ORTHO05D000183 3.3e-08 62.4 123 35.0
Duzib168G2401 Durio zibethinus HOM05D000311 ORTHO05D000183 3.3e-08 62.4 101 37.6
Eucgr.E04279 Eucalyptus grandis HOM05D000311 ORTHO05D000183 4.4e-08 62.0 138 34.1
Gohir.D02G026400 Gossypium hirsutum HOM05D000311 ORTHO05D000183 7.5e-08 61.2 118 35.6
CAN.G222.22 Capsicum annuum HOM05D000311 ORTHO05D000183 1.3e-07 60.5 148 30.4
Duzib212G0651 Durio zibethinus HOM05D000311 ORTHO05D000183 1.3e-07 60.5 129 31.8
Duzib212G0987 Durio zibethinus HOM05D000311 ORTHO05D000183 1.3e-07 60.5 118 33.1
TWI32G0156 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 1.3e-07 60.5 119 34.5
Duzib212G0684 Durio zibethinus HOM05D000311 ORTHO05D000183 1.7e-07 60.1 146 28.1
Potri.003G013200 Populus trichocarpa HOM05D000311 ORTHO05D000183 2.2e-07 59.7 107 37.4
Eucgr.C04070 Eucalyptus grandis HOM05D000311 ORTHO05D000183 2.8e-07 59.3 124 33.1
Oeu034160.1 Olea europaea HOM05D000311 ORTHO05D000183 2.8e-07 59.3 110 36.4
Potri.003G026308 Populus trichocarpa HOM05D000311 ORTHO05D000183 3.7e-07 58.9 115 36.5
Duzib212G0027 Durio zibethinus HOM05D000311 ORTHO05D000183 4.8e-07 58.5 68 42.6
Duzib212G0961 Durio zibethinus HOM05D000311 ORTHO05D000183 4.8e-07 58.5 68 42.6
Gohir.A08G041900 Gossypium hirsutum HOM05D000311 ORTHO05D000183 4.8e-07 58.5 172 27.3
TWI34G1250 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 4.8e-07 58.5 122 36.9
Nitab4.5_0010327g0010 Nicotiana tabacum HOM05D000311 ORTHO05D000183 6.3e-07 58.2 120 34.2
Manes.14G121933 Manihot esculenta HOM05D000311 ORTHO05D000183 1.1e-06 57.4 119 38.7
Gohir.D10G225865 Gossypium hirsutum HOM05D000311 ORTHO05D000183 1.4e-06 57.0 229 24.9
Manes.14G120240 Manihot esculenta HOM05D000311 ORTHO05D000183 1.4e-06 57.0 122 32.8
QL04p003704 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-06 57.0 120 34.2
Gorai.005G031700 Gossypium raimondii HOM05D000311 ORTHO05D000183 1.8e-06 56.6 138 33.3
Potri.005G007600 Populus trichocarpa HOM05D000311 ORTHO05D000183 1.8e-06 56.6 139 30.9
Rhsim01G0024100 Rhododendron simsii HOM05D000311 ORTHO05D000183 1.8e-06 56.6 137 34.3
vmacro07752 Vaccinium macrocarpon HOM05D000311 ORTHO05D000183 2.4e-06 56.2 121 32.2
Eucgr.L01316 Eucalyptus grandis HOM05D000311 ORTHO05D000183 3.1e-06 55.8 124 31.5
TWI34G0418 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 3.1e-06 55.8 122 36.9
TWI34G1007 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 3.1e-06 55.8 122 36.9
Duzib212G0774 Durio zibethinus HOM05D000311 ORTHO05D000183 4.1e-06 55.5 140 30.7
Eucgr.C04413 Eucalyptus grandis HOM05D000311 ORTHO05D000183 4.1e-06 55.5 150 29.3
TWI34G0490 Tripterygium wilfordii HOM05D000311 ORTHO05D000183 5.3e-06 55.1 77 41.6
Gohir.D02G027500 Gossypium hirsutum HOM05D000311 ORTHO05D000183 9.1e-06 54.3 199 29.1
Potri.003G041700 Populus trichocarpa HOM05D000311 ORTHO05D000183 9.1e-06 54.3 142 29.6
Solyc08g016310.3 Solanum lycopersicum HOM05D000311 ORTHO05D000183 9.1e-06 54.3 185 28.6
GSVIVG01017404001 Vitis vinifera HOM05D000311 ORTHO05D000183 9.1e-06 54.3 107 37.4


User provided reference genes

Program Settings