Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031646 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 1.3e-196 689.5 348 100.0
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 3.2e-134 482.3 348 73.9
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 7.0e-113 411.4 350 64.3
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 8.3e-106 387.9 344 62.5
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 5.4e-97 358.6 351 56.7
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 5.6e-94 348.6 350 55.1
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 1.8e-92 343.6 351 56.7
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 2.9e-90 336.3 348 53.7
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 8.3e-90 334.7 376 51.3
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 2.1e-88 330.1 375 52.0
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 6.0e-88 328.6 351 54.4
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 7.8e-88 328.2 350 54.0
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 1.5e-86 323.9 375 51.7
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 8.1e-85 318.2 367 50.7
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 3.4e-83 312.8 349 53.3
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 7.6e-83 311.6 348 49.7
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 2.9e-82 309.7 350 51.4
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 2.9e-82 309.7 353 51.3
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 1.1e-81 307.8 339 50.1
Dinv11710 Davidia involucrata HOM05D005682 ORTHO05D007050 1.9e-81 307.0 216 71.3
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 1.9e-81 307.0 353 49.6
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 1.9e-81 307.0 350 52.3
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 2.4e-81 306.6 350 51.1
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 5.4e-81 305.4 408 45.3
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 4.6e-80 302.4 348 50.0
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 3.0e-79 299.7 349 51.0
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 3.3e-78 296.2 352 50.6
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 3.3e-78 296.2 347 49.3
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 2.8e-77 293.1 351 50.1
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 2.8e-77 293.1 353 49.0
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 2.8e-77 293.1 339 49.3
Nitab4.5_0028170g0010 Nicotiana tabacum HOM05D005682 ORTHO05D007050 4.7e-77 292.4 403 44.9
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 1.4e-76 290.8 357 49.6
Nitab4.5_0000139g0140 Nicotiana tabacum HOM05D005682 ORTHO05D007050 5.2e-76 288.9 403 44.7
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 6.8e-76 288.5 351 49.6
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 6.8e-76 288.5 351 49.3
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 6.8e-76 288.5 352 49.4
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.2e-75 287.7 348 49.7
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 1.2e-75 287.7 354 49.7
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 2.0e-75 287.0 348 47.7
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 5.8e-75 285.4 359 49.0
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 5.8e-75 285.4 354 47.5
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 1.3e-74 284.3 336 51.5
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 1.7e-74 283.9 341 48.7
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 1.7e-74 283.9 351 47.6
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 6.4e-74 282.0 350 47.4
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 6.4e-74 282.0 355 47.3
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 8.4e-74 281.6 347 47.6
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 2.4e-73 280.0 350 47.4
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 2.4e-73 280.0 348 49.1
CAN.G157.16 Capsicum annuum HOM05D005682 ORTHO05D007050 3.2e-73 279.6 408 43.1
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 2.7e-72 276.6 352 48.0
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 3.5e-72 276.2 353 48.2
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 6.0e-72 275.4 344 44.8
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 5.1e-71 272.3 343 46.4
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 8.7e-71 271.6 347 45.0
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 8.7e-71 271.6 318 49.4
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.1e-70 271.2 347 45.5
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 1.5e-70 270.8 343 45.5
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 1.5e-70 270.8 341 44.9
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 2.5e-70 270.0 356 43.5
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 2.5e-70 270.0 402 43.0
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 4.3e-70 269.2 342 47.7
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 4.3e-70 269.2 346 44.8
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 5.6e-70 268.9 347 44.7
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 5.6e-70 268.9 347 45.8
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 3.6e-69 266.2 348 44.0
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 8.1e-69 265.0 355 43.1
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 1.4e-68 264.2 348 43.4
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 5.3e-68 262.3 341 44.0
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 1.2e-67 261.2 354 43.5
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 2.0e-67 260.4 360 44.4
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 4.4e-67 259.2 349 44.1
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 7.6e-67 258.5 362 45.0
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 9.9e-67 258.1 350 45.1
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 1.3e-66 257.7 343 43.4
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 1.7e-66 257.3 327 44.0
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.9e-66 256.5 344 43.0
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.1e-65 254.6 348 43.1
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.9e-65 253.8 351 43.3
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 7.9e-64 248.4 361 44.3
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 1.7e-63 247.3 341 44.9
Hma1.2p1_0499F.1_g166820 Hydrangea macrophylla HOM05D005682 ORTHO05D007050 5.1e-63 245.7 165 69.7
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 1.8e-60 237.3 336 42.6
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 3.4e-59 233.0 346 41.0
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 1.7e-58 230.7 347 42.4
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 2.9e-58 229.9 332 43.1
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 7.1e-57 225.3 402 38.8
CDE04G1407 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 7.9e-56 221.9 418 36.8
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 3.9e-55 219.5 384 38.8
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 1.9e-54 217.2 431 36.0
Os10g0485100 Oryza sativa ssp. japonica HOM05D005682 ORTHO05D007050 2.6e-51 206.8 206 53.9
SHI13893 Sapria himalayana HOM05D005682 ORTHO05D007050 3.8e-50 203.0 338 38.8
HPP92_008567 Vanilla planifolia HOM05D005682 ORTHO05D007050 9.3e-49 198.4 169 58.0
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 3.9e-47 193.0 181 50.3
BcaC05g28417 Brassica carinata HOM05D005682 ORTHO05D007050 6.3e-45 185.7 159 58.5
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 1.0e-42 178.3 271 40.2
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 1.1e-30 138.3 326 34.0
Pp3c7_6630 Physcomitrium patens HOM05D005682 ORTHO05D007050 1.7e-26 124.4 206 35.9
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 3.2e-25 120.2 172 38.4
COL.COLO4_08120 Corchorus olitorius HOM05D005682 ORTHO05D007050 5.5e-25 119.4 343 32.4
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 1.8e-23 114.4 98 65.3
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 2.0e-22 110.9 111 51.4
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 2.6e-22 110.5 225 33.3
Psat4g043640 Pisum sativum HOM05D005682 ORTHO05D007050 3.1e-20 103.6 114 47.4
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 3.2e-17 93.6 175 40.6
CBR_g66815 Chara braunii HOM05D005682 ORTHO05D007050 5.5e-09 66.2 282 24.5


User provided reference genes

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