Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 0.0e+00 1274.6 672 100.0
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 0.0e+00 1261.9 672 99.1
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 5.1e-269 931.0 657 76.0
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 6.2e-267 924.1 663 75.9
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.1e-258 896.7 665 74.1
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 5.3e-258 894.4 682 72.4
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.4e-242 842.4 690 69.1
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 2.4e-242 842.4 662 69.5
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.4e-229 800.0 604 72.4
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.8e-227 792.3 659 67.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 7.7e-225 784.3 643 68.3
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 6.3e-219 764.6 661 65.4
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 9.1e-218 760.8 661 65.1
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 1.2e-217 760.4 660 65.6
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.9e-215 753.1 657 64.4
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 7.2e-215 751.1 666 63.2
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.7e-214 749.2 661 64.3
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.5e-212 743.4 655 64.9
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 2.0e-212 743.0 649 63.8
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.3e-212 742.3 661 64.8
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.2e-211 739.6 658 63.8
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 3.7e-211 738.8 662 63.9
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 5.3e-210 734.9 660 61.8
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 2.6e-204 716.1 658 61.6
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 3.4e-204 715.7 688 60.8
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 6.3e-203 711.4 660 59.8
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 1.6e-201 706.8 654 61.0
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 2.7e-201 706.1 655 61.2
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.9e-201 704.9 674 61.1
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.3e-200 703.7 674 61.0
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.7e-200 703.4 690 58.7
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 5.0e-200 701.8 645 62.5
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 1.5e-199 700.3 657 59.8
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 1.6e-198 696.8 648 60.2
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.3e-197 693.0 652 60.9
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 2.3e-197 693.0 648 60.0
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.4e-196 689.1 717 56.5
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.8e-194 683.3 644 60.9
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 7.0e-194 681.4 639 59.9
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.0e-192 677.6 650 58.5
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 8.6e-192 674.5 648 60.5
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.1e-191 674.1 640 60.0
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.9e-191 673.3 668 57.2
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 3.3e-191 672.5 646 60.4
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 3.6e-190 669.1 663 59.1
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.0e-189 667.5 664 59.9
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.4e-189 667.2 628 60.7
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 5.7e-188 661.8 642 59.3
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.2e-187 659.8 669 57.8
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 3.2e-186 656.0 654 58.7
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 7.0e-186 654.8 629 59.9
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 3.5e-185 652.5 654 58.0
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.3e-183 646.0 799 50.6
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.6e-182 643.7 655 57.6
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 5.8e-180 635.2 648 56.2
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.7e-179 633.6 664 57.7
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 2.2e-179 633.3 648 57.1
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 5.4e-178 628.6 671 57.4
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.6e-177 627.1 687 53.1
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.3e-176 624.0 527 64.5
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 8.6e-176 621.3 768 49.6
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 7.5e-172 608.2 648 54.9
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 6.6e-168 595.1 666 55.0
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.1e-167 594.3 601 57.6
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 3.6e-166 589.3 648 53.4
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 2.9e-163 579.7 652 53.4
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.1e-162 577.8 631 53.7
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 7.1e-162 575.1 652 53.4
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.6e-161 572.4 422 72.3
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 2.5e-159 566.6 650 52.3
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 7.3e-159 565.1 650 51.8
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 4.0e-157 559.3 597 54.3
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 2.2e-155 553.5 655 51.3
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 3.8e-155 552.7 529 59.5
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 6.4e-155 552.0 648 52.2
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 3.9e-152 542.7 681 49.5
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 7.3e-151 538.5 681 49.5
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 9.6e-151 538.1 680 49.4
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 3.6e-150 536.2 683 49.0
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 4.8e-150 535.8 704 48.2
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 5.3e-149 532.3 656 48.0
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 6.9e-149 531.9 662 47.9
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 2.0e-148 530.4 454 64.3
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.3e-147 527.7 707 47.7
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.2e-145 521.2 455 64.4
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.9e-143 513.8 667 48.6
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 4.5e-140 502.7 476 60.9
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 6.7e-136 488.8 526 56.3
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 6.7e-136 488.8 668 45.4
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 4.2e-130 469.5 654 45.7
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 5.1e-128 462.6 503 54.7
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.6e-126 457.6 659 46.6
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 6.9e-125 452.2 671 42.5
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 9.0e-125 451.8 710 41.8
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.5e-119 434.5 665 42.6
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 6.3e-118 429.1 661 41.6
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 1.4e-117 427.9 484 53.7
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 1.1e-114 418.3 650 42.6
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.1e-113 414.1 455 56.0
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.8e-110 402.9 423 56.0
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 1.6e-97 361.3 505 45.1
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.7e-92 344.0 845 33.7
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.5e-92 343.6 307 69.1
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.9e-82 311.2 505 40.6
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 6.3e-78 296.2 216 72.7
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 5.6e-66 256.5 267 61.0
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 3.6e-65 253.8 332 49.7
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 2.1e-60 238.0 165 77.0
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.7e-60 237.7 216 62.0
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.0e-56 223.8 150 80.0
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 3.4e-55 220.7 809 27.8
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 1.2e-52 212.2 751 27.8
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.7e-52 211.1 153 71.2
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 8.1e-49 199.5 219 51.6
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 1.2e-44 185.7 195 54.4
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 4.4e-39 167.2 309 39.5
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 3.6e-33 147.5 189 43.9
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.0e-27 129.4 101 66.3
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-25 122.5 103 68.9
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-25 122.5 147 56.5
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.0e-24 117.5 90 78.9
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 5.8e-23 113.6 78 74.4
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.7e-12 78.2 102 48.0
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 6.0e-12 77.0 52 71.2
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.3e-11 75.1 92 46.7
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.0e-11 74.7 47 78.7
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 5.7e-10 70.5 134 38.1
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 4.8e-09 67.4 41 87.8
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 4.8e-09 67.4 93 41.9
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.8e-08 65.5 50 74.0


User provided reference genes

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