Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031619 Camellia sinensis var. sinensis HOM05D011426 ORTHO05D011041 1.4e-101 372.9 177 100.0
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 1.7e-22 110.2 125 44.0
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.2e-21 105.9 121 42.1
RhsimUnG0114800 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.5e-18 96.3 165 33.9
Rhsim09G0059600 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.3e-18 95.5 175 33.1
Rhsim10G0108400 Rhododendron simsii HOM05D009719 ORTHO05D011041 9.6e-18 94.4 165 33.3
Rhsim01G0005200 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.8e-16 90.1 148 34.5
Rhsim06G0095800 Rhododendron simsii HOM05D011426 ORTHO05D011041 4.1e-16 89.0 122 36.9
Rhsim02G0074000 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.3e-16 88.6 171 32.2
Rhsim05G0131400 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.3e-16 88.6 122 36.9
Rhsim11G0142500 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.3e-16 88.6 122 36.9
Rhsim12G0186600 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.3e-16 88.6 122 36.9
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 5.3e-16 88.6 135 37.0
RhsimUnG0238600 Rhododendron simsii HOM05D011426 ORTHO05D011041 5.8e-15 85.1 123 37.4
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 7.6e-15 84.7 124 38.7
Dinv33528 Davidia involucrata HOM05D007544 ORTHO05D009682 5.5e-13 78.6 137 33.6
RhsimUnG0238500 Rhododendron simsii HOM05D011426 ORTHO05D011041 9.3e-13 77.8 81 45.7
Dinv00626 Davidia involucrata HOM05D007544 ORTHO05D009682 1.2e-12 77.4 125 35.2
Dinv28085 Davidia involucrata HOM05D007544 ORTHO05D009682 2.1e-12 76.6 130 35.4
Rhsim05G0098200 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-12 76.6 81 46.9
Dinv09698 Davidia involucrata HOM05D007544 ORTHO05D009682 2.7e-12 76.3 125 35.2
Rhsim12G0034100 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.8e-11 73.6 58 53.4
Dinv02312 Davidia involucrata HOM05D007544 ORTHO05D009682 2.3e-11 73.2 84 42.9
Rhsim01G0103900 Rhododendron simsii HOM05D011426 ORTHO05D011041 1.1e-10 70.9 93 39.8
Rhsim01G0162700 Rhododendron simsii HOM05D009719 ORTHO05D011041 1.9e-10 70.1 115 34.8
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 1.3e-09 67.4 84 38.1
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 1.3e-09 67.4 107 33.6
Rhsim10G0120700 Rhododendron simsii HOM05D011426 ORTHO05D011041 2.4e-08 63.2 58 46.6
Rhsim07G0149500 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.1e-08 62.8 117 29.9
Rhsim12G0073400 Rhododendron simsii HOM05D009719 ORTHO05D011041 2.0e-07 60.1 53 49.1
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 4.5e-07 58.9 124 31.5
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 5.9e-07 58.5 130 30.8
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 5.9e-07 58.5 153 28.8
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 1.0e-06 57.8 124 29.8
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 1.0e-06 57.8 126 30.2
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 1.3e-06 57.4 130 30.0
Rhsim02G0111600 Rhododendron simsii HOM05D009719 ORTHO05D011041 3.8e-06 55.8 54 44.4
arahy.Tifrunner.gnm1.ann1.MLQS0T Arachis hypogaea HOM05D010233 ORTHO05D010881 5.0e-06 55.5 120 30.8


User provided reference genes

Program Settings