Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.5e-196 687.2 343 100.0
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.8e-170 602.1 302 99.7
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 3.8e-143 511.9 302 84.1
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.1e-141 506.1 296 84.5
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.5e-141 505.4 302 81.5
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 3.5e-141 505.4 302 81.8
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 3.5e-141 505.4 302 81.8
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 7.8e-141 504.2 302 82.1
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.0e-140 503.8 302 82.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 2.3e-140 502.7 301 82.4
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 8.7e-140 500.7 302 80.5
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.1e-139 500.4 302 80.8
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 7.3e-139 497.7 302 80.5
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.2e-138 496.9 302 82.5
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.1e-138 496.1 302 79.8
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 3.6e-138 495.4 302 79.8
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 4.7e-138 495.0 302 81.1
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 4.7e-138 495.0 302 80.1
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.2e-138 494.6 302 81.5
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 8.1e-138 494.2 302 80.8
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 8.1e-138 494.2 302 78.5
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 8.1e-138 494.2 302 80.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 8.1e-138 494.2 302 79.8
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 8.1e-138 494.2 302 81.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.1e-137 493.8 302 81.1
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.4e-137 493.4 300 79.7
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.8e-137 493.0 302 80.8
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 6.9e-137 491.1 297 80.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.2e-136 490.3 302 80.1
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.2e-135 486.1 302 79.8
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.2e-135 486.1 302 79.8
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.9e-135 485.7 302 79.8
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 4.9e-135 485.0 302 79.8
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.9e-134 483.0 302 78.1
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.9e-134 483.0 301 80.1
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 9.3e-134 480.7 301 78.4
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.2e-133 480.3 283 86.2
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.6e-133 479.9 302 80.5
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 3.5e-133 478.8 302 77.5
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 3.5e-133 478.8 302 78.5
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 4.6e-133 478.4 302 77.8
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 4.6e-133 478.4 297 79.8
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.0e-132 477.2 302 77.8
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.0e-132 477.2 302 79.1
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.0e-132 477.2 302 78.8
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.3e-132 476.9 297 79.8
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 2.3e-132 476.1 301 78.1
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 3.9e-132 475.3 302 77.2
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.1e-131 473.8 302 78.1
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.5e-131 473.4 302 79.1
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.9e-131 473.0 302 77.8
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.9e-131 473.0 302 78.5
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 5.6e-131 471.5 302 77.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.6e-130 469.9 302 77.5
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 3.6e-130 468.8 302 76.8
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 8.1e-130 467.6 302 76.5
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.8e-129 466.5 302 76.2
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 3.1e-129 465.7 302 76.5
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.0e-129 465.3 262 89.3
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 4.0e-129 465.3 302 76.8
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 5.3e-129 464.9 302 76.8
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 9.0e-129 464.2 302 75.8
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 9.0e-129 464.2 302 75.8
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.4e-128 462.2 302 76.5
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.4e-128 462.2 301 75.4
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 3.8e-127 458.8 302 74.5
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.1e-126 457.2 300 75.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.9e-126 456.4 284 81.3
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.9e-126 456.4 301 76.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 1.2e-125 453.8 296 74.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.6e-125 453.4 304 73.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.1e-125 453.0 302 73.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.1e-125 453.0 302 73.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.7e-125 452.6 302 73.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 4.6e-125 451.8 302 72.8
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.0e-124 450.7 296 75.7
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 3.9e-124 448.7 302 72.2
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 5.1e-124 448.4 302 71.9
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 4.3e-123 445.3 299 73.2
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.6e-122 443.4 302 73.2
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 4.8e-122 441.8 302 73.5
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 4.0e-121 438.7 301 72.1
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 5.3e-121 438.3 302 72.8
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 9.0e-121 437.6 296 73.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 3.2e-118 429.1 301 70.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 4.2e-118 428.7 291 74.9
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.1e-115 420.6 246 86.6
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.8e-113 413.3 305 68.2
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 5.3e-113 411.8 302 68.5
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.4e-110 403.7 286 71.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.7e-108 394.8 302 65.9
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.5e-107 392.9 264 75.0
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.2e-101 374.0 242 75.6
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.2e-98 363.2 303 60.1
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.3e-97 358.6 196 92.3
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 7.7e-96 354.8 295 64.7
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 5.5e-94 348.6 230 75.7
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 9.4e-94 347.8 271 66.1
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.4e-91 339.0 292 59.2
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.4e-89 334.0 262 66.0
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 3.2e-86 322.8 220 73.2
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 5.5e-86 322.0 296 55.7
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 3.0e-84 316.2 301 54.2
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.6e-75 286.6 294 50.7
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.7e-74 283.9 294 54.1
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.7e-74 283.9 202 70.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.2e-64 251.1 307 45.0
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.5e-64 249.6 143 90.2
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.7e-64 248.4 144 90.3
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 5.5e-62 242.3 213 60.6
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.2e-62 241.9 144 87.5
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.9e-55 219.5 144 82.6
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.1e-54 218.0 302 45.7
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 3.5e-48 196.4 318 38.7
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.8e-44 184.1 164 51.8
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-41 174.1 91 91.2
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.5e-40 169.9 123 68.3
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 2.5e-38 163.7 366 31.7
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 6.8e-36 155.6 317 33.4
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.9e-33 147.5 263 39.9
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.3e-26 124.8 76 77.6
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.7e-26 124.4 333 29.4
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.6e-13 81.3 43 88.4


User provided reference genes

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